Experiment: MoLS4 with L-Valine (HPLC) and L-Leucine 10mM as nutrient
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0631 and DVU0632 are separated by 246 nucleotides DVU0632 and DVU0633 overlap by 1 nucleotides DVU0633 and DVU0634 are separated by 11 nucleotides DVU0634 and DVU0635 are separated by 14 nucleotides
DVU0631: DVU0631 - conserved hypothetical protein (TIGR), at 697,251 to 698,816
DVU0631
DVU0632: DVU0632 - cupin family protein (TIGR), at 699,063 to 699,680
DVU0632
DVU0633: DVU0633 - penicillin-binding protein (TIGR), at 699,680 to 702,103
DVU0633
DVU0634: DVU0634 - hypothetical protein (TIGR), at 702,115 to 702,681
DVU0634
DVU0635: DVU0635 - dolichyl-phosphate-mannose-protein mannosyltransferase family protein (TIGR), at 702,696 to 704,282
DVU0635
Position (kb) 699
700
701
702
703 Strain fitness (log2 ratio) -2
-1
0
1
2 at 698.680 kb on - strand at 698.693 kb on + strand at 698.824 kb on + strand at 698.886 kb on - strand at 698.890 kb on + strand at 698.995 kb on + strand at 699.005 kb on + strand at 699.008 kb on - strand at 699.008 kb on - strand at 699.120 kb on + strand at 699.150 kb on + strand, within DVU0632 at 699.171 kb on + strand, within DVU0632 at 699.179 kb on - strand, within DVU0632 at 699.196 kb on + strand, within DVU0632 at 699.221 kb on - strand, within DVU0632 at 699.264 kb on + strand, within DVU0632 at 699.269 kb on + strand, within DVU0632 at 699.274 kb on + strand, within DVU0632 at 699.274 kb on + strand, within DVU0632 at 699.311 kb on - strand, within DVU0632 at 699.351 kb on + strand, within DVU0632 at 699.359 kb on - strand, within DVU0632 at 699.551 kb on + strand, within DVU0632 at 699.652 kb on + strand at 699.652 kb on + strand at 699.681 kb on + strand at 699.708 kb on - strand at 699.708 kb on - strand at 702.151 kb on + strand at 702.152 kb on + strand at 702.170 kb on + strand at 702.182 kb on + strand, within DVU0634 at 702.188 kb on - strand, within DVU0634 at 702.188 kb on - strand, within DVU0634 at 702.313 kb on - strand, within DVU0634 at 702.314 kb on + strand, within DVU0634 at 702.327 kb on + strand, within DVU0634 at 702.346 kb on + strand, within DVU0634 at 702.353 kb on - strand, within DVU0634 at 702.355 kb on - strand, within DVU0634 at 702.362 kb on - strand, within DVU0634 at 702.552 kb on - strand, within DVU0634 at 702.571 kb on + strand, within DVU0634 at 702.599 kb on + strand, within DVU0634 at 702.662 kb on + strand at 702.701 kb on - strand at 703.084 kb on + strand, within DVU0635
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Valine (HPLC) and L-Leucine 10mM as nutrient remove 698,680 - +0.2 698,693 + +0.3 698,824 + -0.4 698,886 - -0.4 698,890 + +1.6 698,995 + -0.8 699,005 + +0.6 699,008 - +2.2 699,008 - -0.2 699,120 + -0.7 699,150 + DVU0632 0.14 -0.0 699,171 + DVU0632 0.17 -2.0 699,179 - DVU0632 0.19 +0.8 699,196 + DVU0632 0.22 -1.6 699,221 - DVU0632 0.26 +0.3 699,264 + DVU0632 0.33 +0.4 699,269 + DVU0632 0.33 -0.1 699,274 + DVU0632 0.34 -1.8 699,274 + DVU0632 0.34 -1.1 699,311 - DVU0632 0.40 -1.2 699,351 + DVU0632 0.47 -0.9 699,359 - DVU0632 0.48 -1.7 699,551 + DVU0632 0.79 +0.1 699,652 + -0.2 699,652 + -0.5 699,681 + -1.5 699,708 - +0.3 699,708 - +0.6 702,151 + +0.3 702,152 + -1.0 702,170 + -1.1 702,182 + DVU0634 0.12 -2.2 702,188 - DVU0634 0.13 -0.4 702,188 - DVU0634 0.13 +0.9 702,313 - DVU0634 0.35 +1.4 702,314 + DVU0634 0.35 +0.4 702,327 + DVU0634 0.37 -1.3 702,346 + DVU0634 0.41 +1.6 702,353 - DVU0634 0.42 +2.4 702,355 - DVU0634 0.42 -1.0 702,362 - DVU0634 0.44 -0.3 702,552 - DVU0634 0.77 +0.8 702,571 + DVU0634 0.80 -0.6 702,599 + DVU0634 0.85 -0.4 702,662 + -0.7 702,701 - -0.2 703,084 + DVU0635 0.24 +0.1
Or see this region's nucleotide sequence