Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23220

Experiment: L-Glutamine (C)(N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (C)(N); with TAPS; with chloride
5,215,602	+		PFLU_RS23215	0.48	-0.1
5,215,602	+		PFLU_RS23215	0.48	-0.2
5,215,603	-		PFLU_RS23215	0.48	+1.3
5,215,652	+		PFLU_RS23215	0.52	-0.4
5,215,652	+		PFLU_RS23215	0.52	+0.8
5,215,652	+		PFLU_RS23215	0.52	+0.3
5,215,652	+		PFLU_RS23215	0.52	+1.7
5,215,652	+		PFLU_RS23215	0.52	+0.9
5,215,652	+		PFLU_RS23215	0.52	-0.6
5,215,653	-		PFLU_RS23215	0.52	+0.4
5,215,653	-		PFLU_RS23215	0.52	+0.0
5,215,653	-		PFLU_RS23215	0.52	-1.2
5,215,653	-		PFLU_RS23215	0.52	+0.9
5,215,653	-		PFLU_RS23215	0.52	+0.1
5,215,653	-		PFLU_RS23215	0.52	+0.6
5,215,653	-		PFLU_RS23215	0.52	-0.4
5,215,653	-		PFLU_RS23215	0.52	+1.1
5,215,653	-		PFLU_RS23215	0.52	-0.0
5,215,670	+		PFLU_RS23215	0.53	-0.2
5,215,670	+		PFLU_RS23215	0.53	+3.0
5,215,670	+		PFLU_RS23215	0.53	+0.1
5,215,671	-		PFLU_RS23215	0.53	-0.1
5,215,671	-		PFLU_RS23215	0.53	+1.0
5,215,671	-		PFLU_RS23215	0.53	+0.2
5,215,671	-		PFLU_RS23215	0.53	+0.3
5,215,891	+		PFLU_RS23215	0.69	+2.0
5,215,891	+		PFLU_RS23215	0.69	-0.3
5,215,892	-		PFLU_RS23215	0.69	-0.8
5,215,905	-		PFLU_RS23215	0.70	-0.8
5,215,905	-		PFLU_RS23215	0.70	+0.7
5,215,917	+		PFLU_RS23215	0.71	-0.3
5,215,917	+		PFLU_RS23215	0.71	-0.2
5,215,917	+		PFLU_RS23215	0.71	-0.3
5,215,917	+		PFLU_RS23215	0.71	+0.9
5,215,917	+		PFLU_RS23215	0.71	+0.4
5,215,917	+		PFLU_RS23215	0.71	-0.1
5,215,918	-		PFLU_RS23215	0.71	+1.7
5,215,918	-		PFLU_RS23215	0.71	-0.6
5,215,918	-		PFLU_RS23215	0.71	+0.3
5,215,918	-		PFLU_RS23215	0.71	-0.1
5,215,918	-		PFLU_RS23215	0.71	-0.4
5,215,918	-		PFLU_RS23215	0.71	-0.7
5,215,918	-		PFLU_RS23215	0.71	+0.3
5,215,918	-		PFLU_RS23215	0.71	+1.7
5,215,918	-		PFLU_RS23215	0.71	-0.4
5,215,918	-		PFLU_RS23215	0.71	-0.4
5,215,918	-		PFLU_RS23215	0.71	-0.3
5,215,918	-		PFLU_RS23215	0.71	-0.9
5,215,918	-		PFLU_RS23215	0.71	+1.5
5,215,918	-		PFLU_RS23215	0.71	+1.0
5,215,918	-		PFLU_RS23215	0.71	-1.8
5,215,918	-		PFLU_RS23215	0.71	-1.6
5,215,919	+		PFLU_RS23215	0.71	-1.6
5,215,919	+		PFLU_RS23215	0.71	+0.7
5,215,919	+		PFLU_RS23215	0.71	-1.0
5,215,919	+		PFLU_RS23215	0.71	-0.4
5,215,919	+		PFLU_RS23215	0.71	-0.3
5,215,919	+		PFLU_RS23215	0.71	+0.6
5,215,920	-		PFLU_RS23215	0.71	+1.0
5,215,920	-		PFLU_RS23215	0.71	+0.5
5,215,920	-		PFLU_RS23215	0.71	-0.6
5,215,920	-		PFLU_RS23215	0.71	-0.0
5,215,920	-		PFLU_RS23215	0.71	-0.0
5,215,920	-		PFLU_RS23215	0.71	+0.4
5,215,920	-		PFLU_RS23215	0.71	-1.0
5,215,920	-		PFLU_RS23215	0.71	-1.6
5,215,920	-		PFLU_RS23215	0.71	+0.0
5,215,920	-		PFLU_RS23215	0.71	-0.8
5,215,988	+		PFLU_RS23215	0.76	-1.5
5,215,988	+		PFLU_RS23215	0.76	+0.8
5,215,988	+		PFLU_RS23215	0.76	+0.4
5,215,988	+		PFLU_RS23215	0.76	+0.6
5,215,988	+		PFLU_RS23215	0.76	-0.0
5,215,988	+		PFLU_RS23215	0.76	-0.1
5,215,988	+		PFLU_RS23215	0.76	-2.0
5,215,988	+		PFLU_RS23215	0.76	+1.1
5,215,988	+		PFLU_RS23215	0.76	+0.8
5,215,989	-		PFLU_RS23215	0.76	-0.7
5,215,989	-		PFLU_RS23215	0.76	-0.8
5,215,989	-		PFLU_RS23215	0.76	-0.2
5,215,989	-		PFLU_RS23215	0.76	+0.7
5,215,989	-		PFLU_RS23215	0.76	-0.1
5,215,989	-		PFLU_RS23215	0.76	+0.1
5,215,989	-		PFLU_RS23215	0.76	+0.2
5,215,989	-		PFLU_RS23215	0.76	-1.5
5,215,989	-		PFLU_RS23215	0.76	-0.3
5,216,103	-		PFLU_RS23215	0.84	-1.1
5,216,103	-		PFLU_RS23215	0.84	-1.8
5,216,112	+		PFLU_RS23215	0.85	-0.4
5,216,113	-		PFLU_RS23215	0.85	-0.0
5,216,171	+		PFLU_RS23215	0.89	+0.9
5,216,171	+		PFLU_RS23215	0.89	-0.4
5,216,171	+		PFLU_RS23215	0.89	-0.1
5,216,171	+		PFLU_RS23215	0.89	+1.1
5,216,171	+		PFLU_RS23215	0.89	-0.1
5,216,172	-		PFLU_RS23215	0.89	-0.5
5,216,172	-		PFLU_RS23215	0.89	+0.0
5,216,172	-		PFLU_RS23215	0.89	-0.5
5,216,240	+				-1.8
5,216,240	+				-1.0
5,216,240	+				+0.2
5,216,240	+				+0.7
5,216,240	+				-1.9
5,216,240	+				+1.7
5,216,240	+				-0.5
5,216,240	+				+0.7
5,216,240	+				-1.9
5,216,240	+				-0.7
5,216,241	-				+1.4
5,216,241	-				-0.7
5,216,241	-				+0.3
5,216,241	-				+0.8
5,216,241	-				+0.9
5,216,241	-				+0.9
5,216,241	-				-0.4
5,216,244	+				-0.5
5,216,244	+				+0.0
5,216,244	+				+0.7
5,216,244	+				-1.9
5,216,244	+				+0.4
5,216,244	+				+0.7
5,216,244	+				+0.5
5,216,244	+				+1.0
5,216,244	+				-2.0
5,216,245	-				-0.2
5,216,245	-				+0.1
5,216,245	-				-0.3
5,216,245	-				+0.2
5,216,245	-				+0.6
5,216,245	-				-0.6
5,216,245	-				-0.3
5,216,245	-				+2.6
5,216,245	-				+0.9
5,216,245	-				-0.6
5,216,288	+				-1.5
5,216,289	-				-1.1
5,216,372	+				-0.1
5,216,372	+				-1.1
5,216,372	+				-1.1
5,216,372	+				-1.6
5,216,372	+				+0.9
5,216,372	+				-0.7
5,216,372	+				+1.0
5,216,372	+				-0.0
5,216,372	+				+0.5
5,216,372	+				-0.5
5,216,373	-				-0.2
5,216,373	-				+0.2
5,216,373	-				-1.5
5,216,373	-				+1.0
5,216,373	-				-0.4
5,216,423	+				+0.7
5,216,423	+				+0.1
5,216,424	-				+0.4
5,216,480	+				+0.7
5,216,480	+				+1.2
5,216,480	+				+0.1
5,216,481	-				-0.4
5,216,484	+				+0.7
5,216,484	+				+0.7
5,216,484	+				-1.3
5,216,484	+				-0.2
5,216,484	+				-0.5
5,216,485	-				-0.2
5,216,485	-				+4.7
5,216,485	-				-0.2
5,216,485	-				-1.1
5,216,485	-				+1.1
5,216,485	-				+0.0
5,216,485	-				-0.6
5,216,485	-				+0.5
5,216,485	-				-1.6
5,216,570	+				+0.4
5,216,570	+				+1.5
5,216,632	+		PFLU_RS23220	0.51	-0.3
5,216,632	+		PFLU_RS23220	0.51	-1.5
5,216,633	-		PFLU_RS23220	0.52	-3.4
5,216,633	-		PFLU_RS23220	0.52	+0.9
5,216,633	-		PFLU_RS23220	0.52	-0.1
5,216,633	-		PFLU_RS23220	0.52	+0.7
5,216,633	-		PFLU_RS23220	0.52	+0.7
5,216,649	-		PFLU_RS23220	0.73	-1.1
5,216,649	-		PFLU_RS23220	0.73	+0.1
5,216,661	+		PFLU_RS23220	0.88	-1.5
5,216,662	-				+0.2
5,216,662	-				-2.0
5,216,751	+				+0.1
5,216,766	+				+0.5
5,216,766	+				+2.4
5,216,766	+				-1.0
5,216,766	+				-0.5
5,216,767	-				+0.5
5,216,767	-				+1.0
5,216,767	-				-0.6
5,216,767	-				-0.1
5,216,767	-				+1.4
5,216,767	-				+0.5
5,216,767	-				-1.3
5,216,767	-				+0.1
5,216,923	-				-1.0
5,216,923	-				+0.6
5,216,944	+				+0.3
5,216,945	-				-0.1
5,216,953	+				-0.7
5,216,990	+				+0.5
5,216,990	+				-1.3
5,216,990	+				-3.3
5,216,990	+				+0.4
5,216,990	+				+1.9
5,216,990	+				-0.1
5,216,990	+				-2.3
5,216,990	+				+1.5
5,216,990	+				-2.1
5,216,990	+				-1.1
5,216,990	+				-1.1
5,216,990	+				+1.0
5,216,990	+				+1.1
5,216,991	-				-0.4
5,216,991	-				-0.6
5,216,991	-				-0.4
5,216,991	-				-1.8
5,216,991	-				-0.5
5,216,991	-				-1.1
5,216,991	-				+0.1
5,216,991	-				-1.8
5,216,991	-				-0.3
5,216,991	-				+0.2
5,216,991	-				-0.3
5,216,991	-				-0.5
5,217,428	+				+0.7
5,217,428	+				-0.0
5,217,428	+				+0.5
5,217,428	+				-2.1
5,217,429	-				-1.0
5,217,429	-				-0.3
5,217,433	+				-0.4
5,217,433	+				-0.2
5,217,433	+				+0.1
5,217,433	+				-0.1
5,217,433	+				+0.7
5,217,433	+				+1.7
5,217,433	+				-1.0
5,217,433	+				-1.0
5,217,433	+				+0.7
5,217,433	+				+0.3
5,217,433	+				-0.1
5,217,433	+				-0.0
5,217,433	+				-0.2
5,217,433	+				-0.1
5,217,433	+				-0.3
5,217,433	+				+0.2
5,217,433	+				-0.5
5,217,433	+				-2.5
5,217,433	+				+0.7
5,217,434	-				-0.9
5,217,434	-				-0.4
5,217,434	-				+0.4
5,217,434	-				+0.4
5,217,434	-				+1.3
5,217,434	-				-0.2
5,217,434	-				-0.1
5,217,434	-				-0.1
5,217,434	-				+2.4
5,217,434	-				+0.3
5,217,434	-				-0.5
5,217,434	-				-0.2
5,217,434	-				+0.8
5,217,434	-				-0.3
5,217,434	-				+0.8
5,217,434	-				+0.0
5,217,434	-				+0.6
5,217,434	-				-0.3
5,217,434	-				-1.3
5,217,434	-				+0.1
5,217,434	-				+0.1
5,217,434	-				+0.6
5,217,434	-				+0.4
5,217,434	-				+0.4
5,217,434	-				-2.1
5,217,434	-				+1.7
5,217,434	-				-1.6
5,217,434	-				-0.4
5,217,434	-				-1.6
5,217,434	-				-1.1
5,217,452	+				-0.3
5,217,471	-				+1.0
5,217,476	+				+0.5
5,217,476	+				-1.1
5,217,482	+				+0.0
5,217,482	+				-0.4
5,217,622	-		PFLU_RS31780	0.45	+0.6
5,217,630	+		PFLU_RS31780	0.48	-0.8
5,217,642	+		PFLU_RS31780	0.54	+1.7
5,217,643	-		PFLU_RS31780	0.54	-0.9