Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0762 and Psest_0763 overlap by 4 nucleotides Psest_0763 and Psest_0764 are separated by 241 nucleotides Psest_0764 and Psest_0765 are separated by 409 nucleotides Psest_0765 and Psest_0766 are separated by 12 nucleotides
Psest_0762: Psest_0762 - Glucose/sorbosone dehydrogenases, at 831,318 to 832,616
_0762
Psest_0763: Psest_0763 - Predicted membrane protein, at 832,613 to 833,062
_0763
Psest_0764: Psest_0764 - diguanylate cyclase (GGDEF) domain, at 833,304 to 834,860
_0764
Psest_0765: Psest_0765 - hypothetical protein, at 835,270 to 835,599
_0765
Psest_0766: Psest_0766 - hypothetical protein, at 835,612 to 836,016
_0766
Position (kb) 833
834
835 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 832.438 kb on - strand, within Psest_0762 at 832.526 kb on - strand at 832.526 kb on - strand at 832.673 kb on + strand, within Psest_0763 at 832.750 kb on + strand, within Psest_0763 at 832.788 kb on + strand, within Psest_0763 at 832.788 kb on + strand, within Psest_0763 at 832.788 kb on + strand, within Psest_0763 at 832.789 kb on - strand, within Psest_0763 at 832.789 kb on - strand, within Psest_0763 at 832.789 kb on - strand, within Psest_0763 at 832.917 kb on + strand, within Psest_0763 at 832.917 kb on + strand, within Psest_0763 at 832.918 kb on - strand, within Psest_0763 at 832.918 kb on - strand, within Psest_0763 at 832.929 kb on + strand, within Psest_0763 at 832.930 kb on - strand, within Psest_0763 at 832.930 kb on - strand, within Psest_0763 at 833.023 kb on + strand at 833.024 kb on - strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.064 kb on + strand at 833.065 kb on - strand at 833.065 kb on - strand at 833.065 kb on - strand at 833.065 kb on - strand at 833.065 kb on - strand at 833.065 kb on - strand at 833.068 kb on + strand at 833.068 kb on + strand at 833.144 kb on + strand at 833.145 kb on - strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.359 kb on + strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.360 kb on - strand at 833.587 kb on + strand, within Psest_0764 at 833.587 kb on + strand, within Psest_0764 at 833.587 kb on + strand, within Psest_0764 at 833.587 kb on + strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.588 kb on - strand, within Psest_0764 at 833.631 kb on + strand, within Psest_0764 at 833.632 kb on - strand, within Psest_0764 at 833.732 kb on - strand, within Psest_0764 at 833.809 kb on + strand, within Psest_0764 at 833.809 kb on + strand, within Psest_0764 at 833.810 kb on - strand, within Psest_0764 at 833.810 kb on - strand, within Psest_0764 at 833.825 kb on - strand, within Psest_0764 at 833.934 kb on + strand, within Psest_0764 at 833.934 kb on + strand, within Psest_0764 at 833.935 kb on - strand, within Psest_0764 at 833.935 kb on - strand, within Psest_0764 at 833.935 kb on - strand, within Psest_0764 at 833.935 kb on - strand, within Psest_0764 at 834.246 kb on + strand, within Psest_0764 at 834.265 kb on + strand, within Psest_0764 at 834.265 kb on + strand, within Psest_0764 at 834.266 kb on - strand, within Psest_0764 at 834.266 kb on - strand, within Psest_0764 at 834.266 kb on - strand, within Psest_0764 at 834.266 kb on - strand, within Psest_0764 at 834.284 kb on - strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.379 kb on + strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.380 kb on - strand, within Psest_0764 at 834.409 kb on + strand, within Psest_0764 at 834.519 kb on + strand, within Psest_0764 at 834.539 kb on - strand, within Psest_0764 at 834.580 kb on + strand, within Psest_0764 at 834.580 kb on + strand, within Psest_0764 at 834.580 kb on + strand, within Psest_0764 at 834.580 kb on + strand, within Psest_0764 at 834.580 kb on + strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.581 kb on - strand, within Psest_0764 at 834.695 kb on + strand, within Psest_0764 at 834.732 kb on + strand at 834.864 kb on + strand at 834.881 kb on + strand at 834.896 kb on - strand at 834.921 kb on + strand at 835.005 kb on + strand at 835.006 kb on - strand at 835.122 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.282 kb on + strand at 835.283 kb on - strand at 835.283 kb on - strand at 835.283 kb on - strand at 835.283 kb on - strand at 835.354 kb on + strand, within Psest_0765 at 835.354 kb on + strand, within Psest_0765 at 835.355 kb on - strand, within Psest_0765 at 835.357 kb on - strand, within Psest_0765 at 835.357 kb on - strand, within Psest_0765 at 835.357 kb on - strand, within Psest_0765 at 835.502 kb on + strand, within Psest_0765 at 835.502 kb on + strand, within Psest_0765 at 835.503 kb on - strand, within Psest_0765 at 835.565 kb on + strand, within Psest_0765 at 835.566 kb on - strand, within Psest_0765 at 835.569 kb on + strand at 835.570 kb on - strand at 835.682 kb on + strand, within Psest_0766
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 832,438 - Psest_0762 0.86 +0.4 832,526 - -0.6 832,526 - -0.3 832,673 + Psest_0763 0.13 +0.8 832,750 + Psest_0763 0.30 -0.3 832,788 + Psest_0763 0.39 +0.7 832,788 + Psest_0763 0.39 +0.2 832,788 + Psest_0763 0.39 -0.1 832,789 - Psest_0763 0.39 -0.8 832,789 - Psest_0763 0.39 -2.9 832,789 - Psest_0763 0.39 -0.9 832,917 + Psest_0763 0.68 +0.7 832,917 + Psest_0763 0.68 -1.4 832,918 - Psest_0763 0.68 -0.7 832,918 - Psest_0763 0.68 +1.5 832,929 + Psest_0763 0.70 -0.8 832,930 - Psest_0763 0.70 +1.2 832,930 - Psest_0763 0.70 -0.8 833,023 + +0.2 833,024 - -0.2 833,064 + -1.4 833,064 + +0.3 833,064 + -1.3 833,064 + -0.8 833,064 + +1.5 833,064 + +0.3 833,064 + +0.2 833,064 + +0.0 833,064 + +0.6 833,064 + -1.1 833,064 + +0.5 833,064 + -2.1 833,064 + -0.5 833,064 + -0.0 833,064 + +1.4 833,064 + -1.1 833,064 + -1.3 833,064 + +0.1 833,065 - -0.4 833,065 - -0.5 833,065 - +0.4 833,065 - -0.3 833,065 - +1.0 833,065 - -0.9 833,068 + -1.9 833,068 + -0.4 833,144 + -1.0 833,145 - +1.7 833,359 + -2.3 833,359 + -0.2 833,359 + -0.4 833,359 + -1.1 833,359 + +0.6 833,359 + -0.2 833,359 + -1.3 833,359 + -2.3 833,359 + -0.3 833,359 + -1.4 833,359 + +0.5 833,359 + +0.0 833,359 + +2.0 833,359 + -0.2 833,359 + +0.9 833,360 - -1.0 833,360 - -0.7 833,360 - +1.1 833,360 - +0.4 833,360 - -1.6 833,360 - -0.8 833,360 - +0.3 833,360 - -0.6 833,360 - +0.0 833,360 - -0.7 833,587 + Psest_0764 0.18 -0.6 833,587 + Psest_0764 0.18 -1.7 833,587 + Psest_0764 0.18 +1.4 833,587 + Psest_0764 0.18 +0.3 833,588 - Psest_0764 0.18 -0.5 833,588 - Psest_0764 0.18 +0.8 833,588 - Psest_0764 0.18 +0.1 833,588 - Psest_0764 0.18 -0.3 833,588 - Psest_0764 0.18 -0.8 833,588 - Psest_0764 0.18 -1.6 833,588 - Psest_0764 0.18 +0.4 833,588 - Psest_0764 0.18 -1.0 833,588 - Psest_0764 0.18 +1.4 833,588 - Psest_0764 0.18 -0.8 833,588 - Psest_0764 0.18 -0.8 833,588 - Psest_0764 0.18 +0.0 833,588 - Psest_0764 0.18 +0.5 833,588 - Psest_0764 0.18 -1.0 833,588 - Psest_0764 0.18 -1.4 833,588 - Psest_0764 0.18 +1.6 833,631 + Psest_0764 0.21 +1.5 833,632 - Psest_0764 0.21 +0.9 833,732 - Psest_0764 0.27 -1.2 833,809 + Psest_0764 0.32 +0.3 833,809 + Psest_0764 0.32 -0.1 833,810 - Psest_0764 0.32 -1.7 833,810 - Psest_0764 0.32 -0.1 833,825 - Psest_0764 0.33 -2.1 833,934 + Psest_0764 0.40 -1.4 833,934 + Psest_0764 0.40 +0.1 833,935 - Psest_0764 0.41 -0.6 833,935 - Psest_0764 0.41 -1.0 833,935 - Psest_0764 0.41 -1.1 833,935 - Psest_0764 0.41 -0.1 834,246 + Psest_0764 0.61 -1.2 834,265 + Psest_0764 0.62 -1.9 834,265 + Psest_0764 0.62 +2.2 834,266 - Psest_0764 0.62 +0.4 834,266 - Psest_0764 0.62 -0.0 834,266 - Psest_0764 0.62 -0.8 834,266 - Psest_0764 0.62 -0.9 834,284 - Psest_0764 0.63 -0.8 834,379 + Psest_0764 0.69 +0.8 834,379 + Psest_0764 0.69 +0.5 834,379 + Psest_0764 0.69 -0.6 834,379 + Psest_0764 0.69 +1.2 834,379 + Psest_0764 0.69 -2.3 834,379 + Psest_0764 0.69 -1.5 834,379 + Psest_0764 0.69 -0.3 834,379 + Psest_0764 0.69 -0.4 834,379 + Psest_0764 0.69 -1.5 834,379 + Psest_0764 0.69 -1.6 834,380 - Psest_0764 0.69 -3.9 834,380 - Psest_0764 0.69 +0.2 834,380 - Psest_0764 0.69 +0.2 834,380 - Psest_0764 0.69 -2.5 834,380 - Psest_0764 0.69 +0.4 834,380 - Psest_0764 0.69 -2.0 834,380 - Psest_0764 0.69 -3.6 834,380 - Psest_0764 0.69 +1.5 834,380 - Psest_0764 0.69 -0.1 834,380 - Psest_0764 0.69 -0.2 834,380 - Psest_0764 0.69 +0.3 834,380 - Psest_0764 0.69 +0.4 834,380 - Psest_0764 0.69 -0.3 834,380 - Psest_0764 0.69 -0.8 834,380 - Psest_0764 0.69 +0.4 834,380 - Psest_0764 0.69 +0.8 834,380 - Psest_0764 0.69 -1.8 834,380 - Psest_0764 0.69 -1.3 834,380 - Psest_0764 0.69 +0.7 834,380 - Psest_0764 0.69 +0.3 834,380 - Psest_0764 0.69 -0.3 834,409 + Psest_0764 0.71 -0.5 834,519 + Psest_0764 0.78 -1.1 834,539 - Psest_0764 0.79 -2.8 834,580 + Psest_0764 0.82 -1.0 834,580 + Psest_0764 0.82 -0.6 834,580 + Psest_0764 0.82 +0.6 834,580 + Psest_0764 0.82 +1.2 834,580 + Psest_0764 0.82 +1.2 834,581 - Psest_0764 0.82 -0.2 834,581 - Psest_0764 0.82 +0.0 834,581 - Psest_0764 0.82 -0.7 834,581 - Psest_0764 0.82 -0.3 834,581 - Psest_0764 0.82 +0.2 834,581 - Psest_0764 0.82 +1.0 834,581 - Psest_0764 0.82 -1.5 834,581 - Psest_0764 0.82 +0.8 834,695 + Psest_0764 0.89 -0.6 834,732 + -1.5 834,864 + -1.2 834,881 + +0.6 834,896 - -1.0 834,921 + -3.0 835,005 + -0.4 835,006 - +0.6 835,122 + -1.7 835,282 + -0.6 835,282 + -0.5 835,282 + -0.1 835,282 + -0.1 835,282 + +2.7 835,282 + +0.3 835,282 + +0.9 835,282 + -0.5 835,282 + +0.5 835,283 - +3.5 835,283 - +0.6 835,283 - -0.1 835,283 - +0.4 835,354 + Psest_0765 0.25 -1.1 835,354 + Psest_0765 0.25 -1.8 835,355 - Psest_0765 0.26 +0.2 835,357 - Psest_0765 0.26 -2.6 835,357 - Psest_0765 0.26 -1.2 835,357 - Psest_0765 0.26 +0.7 835,502 + Psest_0765 0.70 +3.3 835,502 + Psest_0765 0.70 -0.1 835,503 - Psest_0765 0.71 +0.1 835,565 + Psest_0765 0.89 -1.2 835,566 - Psest_0765 0.90 +0.0 835,569 + +1.0 835,570 - +0.1 835,682 + Psest_0766 0.17 -0.3
Or see this region's nucleotide sequence