Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0667 and Psest_0668 are separated by 6 nucleotides Psest_0668 and Psest_0669 are separated by 85 nucleotides Psest_0669 and Psest_0670 are separated by 14 nucleotides
Psest_0667: Psest_0667 - Phosphodiesterase/alkaline phosphatase D, at 726,330 to 727,883
_0667
Psest_0668: Psest_0668 - Ethanolamine ammonia-lyase, small subunit, at 727,890 to 728,684
_0668
Psest_0669: Psest_0669 - Ethanolamine ammonia-lyase, large subunit, at 728,770 to 730,161
_0669
Psest_0670: Psest_0670 - ethanolamine permease, at 730,176 to 731,624
_0670
Position (kb) 728
729
730
731 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 727.817 kb on - strand at 727.817 kb on - strand at 727.849 kb on - strand at 727.938 kb on + strand at 727.962 kb on + strand at 728.002 kb on + strand, within Psest_0668 at 728.002 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.029 kb on + strand, within Psest_0668 at 728.030 kb on - strand, within Psest_0668 at 728.030 kb on - strand, within Psest_0668 at 728.030 kb on - strand, within Psest_0668 at 728.110 kb on + strand, within Psest_0668 at 728.110 kb on + strand, within Psest_0668 at 728.110 kb on + strand, within Psest_0668 at 728.110 kb on + strand, within Psest_0668 at 728.111 kb on - strand, within Psest_0668 at 728.111 kb on - strand, within Psest_0668 at 728.111 kb on - strand, within Psest_0668 at 728.111 kb on - strand, within Psest_0668 at 728.111 kb on - strand, within Psest_0668 at 728.434 kb on + strand, within Psest_0668 at 728.434 kb on + strand, within Psest_0668 at 728.434 kb on + strand, within Psest_0668 at 728.434 kb on + strand, within Psest_0668 at 728.435 kb on - strand at 728.483 kb on + strand, within Psest_0668 at 728.483 kb on + strand, within Psest_0668 at 728.483 kb on + strand, within Psest_0668 at 728.484 kb on - strand, within Psest_0668 at 728.484 kb on - strand, within Psest_0668 at 728.688 kb on + strand at 728.918 kb on + strand, within Psest_0669 at 728.918 kb on + strand, within Psest_0669 at 728.918 kb on + strand, within Psest_0669 at 728.918 kb on + strand, within Psest_0669 at 728.918 kb on + strand, within Psest_0669 at 728.918 kb on + strand, within Psest_0669 at 728.919 kb on - strand, within Psest_0669 at 728.919 kb on - strand, within Psest_0669 at 728.919 kb on - strand, within Psest_0669 at 728.919 kb on - strand, within Psest_0669 at 728.919 kb on - strand, within Psest_0669 at 728.948 kb on + strand, within Psest_0669 at 729.066 kb on - strand, within Psest_0669 at 729.066 kb on - strand, within Psest_0669 at 729.152 kb on + strand, within Psest_0669 at 729.152 kb on + strand, within Psest_0669 at 729.153 kb on - strand, within Psest_0669 at 729.158 kb on + strand, within Psest_0669 at 729.158 kb on + strand, within Psest_0669 at 729.158 kb on + strand, within Psest_0669 at 729.158 kb on + strand, within Psest_0669 at 729.159 kb on - strand, within Psest_0669 at 729.206 kb on + strand, within Psest_0669 at 729.206 kb on + strand, within Psest_0669 at 729.206 kb on + strand, within Psest_0669 at 729.206 kb on + strand, within Psest_0669 at 729.207 kb on - strand, within Psest_0669 at 729.207 kb on - strand, within Psest_0669 at 729.207 kb on - strand, within Psest_0669 at 729.224 kb on + strand, within Psest_0669 at 729.305 kb on + strand, within Psest_0669 at 729.305 kb on + strand, within Psest_0669 at 729.306 kb on - strand, within Psest_0669 at 729.357 kb on - strand, within Psest_0669 at 729.357 kb on - strand, within Psest_0669 at 730.255 kb on + strand at 730.255 kb on + strand at 730.255 kb on + strand at 730.255 kb on + strand at 730.256 kb on - strand at 730.256 kb on - strand at 730.256 kb on - strand at 730.267 kb on + strand at 730.268 kb on - strand at 730.285 kb on + strand at 730.285 kb on + strand at 730.285 kb on + strand at 730.285 kb on + strand at 730.286 kb on - strand at 730.286 kb on - strand at 730.286 kb on - strand at 730.286 kb on - strand at 730.286 kb on - strand at 730.399 kb on + strand, within Psest_0670 at 730.462 kb on + strand, within Psest_0670 at 730.462 kb on + strand, within Psest_0670 at 730.462 kb on + strand, within Psest_0670 at 730.463 kb on - strand, within Psest_0670 at 730.463 kb on - strand, within Psest_0670 at 730.463 kb on - strand, within Psest_0670 at 730.463 kb on - strand, within Psest_0670 at 730.463 kb on - strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.651 kb on + strand, within Psest_0670 at 730.652 kb on - strand, within Psest_0670 at 730.652 kb on - strand, within Psest_0670 at 730.652 kb on - strand, within Psest_0670 at 730.652 kb on - strand, within Psest_0670 at 730.652 kb on - strand, within Psest_0670 at 730.839 kb on + strand, within Psest_0670 at 730.972 kb on + strand, within Psest_0670 at 730.978 kb on + strand, within Psest_0670 at 731.141 kb on + strand, within Psest_0670 at 731.142 kb on - strand, within Psest_0670 at 731.142 kb on - strand, within Psest_0670 at 731.142 kb on - strand, within Psest_0670
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 727,817 - +0.7 727,817 - +0.5 727,849 - +1.2 727,938 + -0.1 727,962 + -2.0 728,002 + Psest_0668 0.14 -1.3 728,002 + Psest_0668 0.14 -0.3 728,029 + Psest_0668 0.17 +0.1 728,029 + Psest_0668 0.17 +2.0 728,029 + Psest_0668 0.17 -1.2 728,029 + Psest_0668 0.17 -0.2 728,029 + Psest_0668 0.17 +1.1 728,029 + Psest_0668 0.17 -0.9 728,029 + Psest_0668 0.17 +0.2 728,030 - Psest_0668 0.18 +0.2 728,030 - Psest_0668 0.18 -0.7 728,030 - Psest_0668 0.18 +0.8 728,110 + Psest_0668 0.28 -0.5 728,110 + Psest_0668 0.28 +0.7 728,110 + Psest_0668 0.28 +0.3 728,110 + Psest_0668 0.28 +0.8 728,111 - Psest_0668 0.28 -0.3 728,111 - Psest_0668 0.28 -1.1 728,111 - Psest_0668 0.28 -1.0 728,111 - Psest_0668 0.28 -0.3 728,111 - Psest_0668 0.28 +0.6 728,434 + Psest_0668 0.68 -0.9 728,434 + Psest_0668 0.68 -1.2 728,434 + Psest_0668 0.68 +0.3 728,434 + Psest_0668 0.68 +0.1 728,435 - +1.1 728,483 + Psest_0668 0.75 -1.9 728,483 + Psest_0668 0.75 -2.1 728,483 + Psest_0668 0.75 -1.6 728,484 - Psest_0668 0.75 -0.1 728,484 - Psest_0668 0.75 -0.7 728,688 + -1.3 728,918 + Psest_0669 0.11 +0.9 728,918 + Psest_0669 0.11 -0.2 728,918 + Psest_0669 0.11 +1.8 728,918 + Psest_0669 0.11 +1.1 728,918 + Psest_0669 0.11 -0.0 728,918 + Psest_0669 0.11 +0.1 728,919 - Psest_0669 0.11 +0.8 728,919 - Psest_0669 0.11 +1.0 728,919 - Psest_0669 0.11 -1.8 728,919 - Psest_0669 0.11 +0.3 728,919 - Psest_0669 0.11 +0.6 728,948 + Psest_0669 0.13 -1.3 729,066 - Psest_0669 0.21 +2.4 729,066 - Psest_0669 0.21 +0.7 729,152 + Psest_0669 0.27 +0.5 729,152 + Psest_0669 0.27 -0.4 729,153 - Psest_0669 0.28 -1.2 729,158 + Psest_0669 0.28 -1.3 729,158 + Psest_0669 0.28 +1.0 729,158 + Psest_0669 0.28 -0.5 729,158 + Psest_0669 0.28 +1.3 729,159 - Psest_0669 0.28 +0.6 729,206 + Psest_0669 0.31 -0.7 729,206 + Psest_0669 0.31 -3.3 729,206 + Psest_0669 0.31 +2.8 729,206 + Psest_0669 0.31 -1.9 729,207 - Psest_0669 0.31 +0.9 729,207 - Psest_0669 0.31 -2.3 729,207 - Psest_0669 0.31 +1.3 729,224 + Psest_0669 0.33 +0.4 729,305 + Psest_0669 0.38 -1.6 729,305 + Psest_0669 0.38 +0.3 729,306 - Psest_0669 0.39 -1.3 729,357 - Psest_0669 0.42 +1.6 729,357 - Psest_0669 0.42 -0.7 730,255 + -0.5 730,255 + -0.5 730,255 + -0.4 730,255 + -1.1 730,256 - -0.6 730,256 - -0.3 730,256 - -0.5 730,267 + +0.1 730,268 - -1.6 730,285 + -0.4 730,285 + -2.1 730,285 + -1.5 730,285 + -0.2 730,286 - -1.2 730,286 - +0.4 730,286 - +0.9 730,286 - +0.9 730,286 - -1.4 730,399 + Psest_0670 0.15 +0.1 730,462 + Psest_0670 0.20 -0.9 730,462 + Psest_0670 0.20 -0.8 730,462 + Psest_0670 0.20 -0.1 730,463 - Psest_0670 0.20 -1.0 730,463 - Psest_0670 0.20 -1.0 730,463 - Psest_0670 0.20 +2.2 730,463 - Psest_0670 0.20 -1.8 730,463 - Psest_0670 0.20 -0.9 730,651 + Psest_0670 0.33 -0.2 730,651 + Psest_0670 0.33 -1.6 730,651 + Psest_0670 0.33 -0.5 730,651 + Psest_0670 0.33 -0.5 730,651 + Psest_0670 0.33 -0.5 730,651 + Psest_0670 0.33 +0.1 730,651 + Psest_0670 0.33 +0.0 730,652 - Psest_0670 0.33 -0.3 730,652 - Psest_0670 0.33 -2.1 730,652 - Psest_0670 0.33 +0.3 730,652 - Psest_0670 0.33 -0.1 730,652 - Psest_0670 0.33 +0.4 730,839 + Psest_0670 0.46 -0.9 730,972 + Psest_0670 0.55 +0.1 730,978 + Psest_0670 0.55 +1.5 731,141 + Psest_0670 0.67 +0.9 731,142 - Psest_0670 0.67 +0.8 731,142 - Psest_0670 0.67 -0.6 731,142 - Psest_0670 0.67 -1.0
Or see this region's nucleotide sequence