Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3110

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,286,739	+				+0.1
3,286,740	-				+1.0
3,286,740	-				-2.3
3,286,906	-		Psest_3109	0.22	-0.3
3,286,906	-		Psest_3109	0.22	-0.2
3,286,909	+		Psest_3109	0.22	-0.4
3,286,909	+		Psest_3109	0.22	+1.1
3,286,909	+		Psest_3109	0.22	-1.9
3,286,909	+		Psest_3109	0.22	-2.0
3,286,909	+		Psest_3109	0.22	+0.8
3,286,909	+		Psest_3109	0.22	-1.6
3,286,909	+		Psest_3109	0.22	-1.3
3,286,909	+		Psest_3109	0.22	+0.4
3,286,909	+		Psest_3109	0.22	-0.6
3,286,909	+		Psest_3109	0.22	-2.2
3,286,909	+		Psest_3109	0.22	+0.8
3,286,909	+		Psest_3109	0.22	-0.2
3,286,909	+		Psest_3109	0.22	+0.2
3,286,909	+		Psest_3109	0.22	+2.5
3,286,909	+		Psest_3109	0.22	-0.9
3,286,909	+		Psest_3109	0.22	+1.5
3,286,909	+		Psest_3109	0.22	+3.3
3,286,910	-		Psest_3109	0.22	+0.7
3,286,910	-		Psest_3109	0.22	-1.2
3,286,910	-		Psest_3109	0.22	+1.2
3,286,910	-		Psest_3109	0.22	-2.4
3,286,910	-		Psest_3109	0.22	-1.1
3,286,910	-		Psest_3109	0.22	+0.2
3,286,910	-		Psest_3109	0.22	+0.3
3,286,910	-		Psest_3109	0.22	-1.2
3,286,910	-		Psest_3109	0.22	-0.1
3,286,910	-		Psest_3109	0.22	+1.2
3,286,910	-		Psest_3109	0.22	-0.2
3,286,910	-		Psest_3109	0.22	+0.3
3,286,910	-		Psest_3109	0.22	-0.4
3,286,910	-		Psest_3109	0.22	-0.9
3,286,910	-		Psest_3109	0.22	-0.6
3,286,910	-		Psest_3109	0.22	-2.4
3,286,910	-		Psest_3109	0.22	+1.3
3,286,910	-		Psest_3109	0.22	+0.2
3,286,910	-		Psest_3109	0.22	-0.0
3,286,910	-		Psest_3109	0.22	-0.3
3,287,297	+		Psest_3109	0.70	-0.5
3,287,297	+		Psest_3109	0.70	+0.4
3,287,297	+		Psest_3109	0.70	-1.2
3,287,298	-		Psest_3109	0.70	+0.3
3,287,340	-		Psest_3109	0.75	-1.6
3,287,431	-		Psest_3109	0.86	+0.0
3,287,551	-				+0.5
3,287,624	+				-0.1
3,287,624	+				+0.8
3,287,624	+				-0.2
3,287,624	+				+0.9
3,287,624	+				+2.6
3,287,624	+				+0.9
3,287,624	+				-1.5
3,287,624	+				-0.4
3,287,624	+				-0.0
3,287,624	+				-0.7
3,287,625	-				-0.7
3,287,625	-				+0.1
3,287,625	-				+0.9
3,287,625	-				+0.4
3,287,625	-				-1.5
3,287,625	-				+0.5
3,287,625	-				-1.2
3,287,625	-				+3.3
3,287,625	-				+0.3
3,287,625	-				-1.3
3,287,625	-				+0.8
3,287,625	-				+0.1
3,287,625	-				-0.9
3,287,625	-				+1.9
3,287,938	+		Psest_3110	0.31	-0.6
3,287,938	+		Psest_3110	0.31	-0.8
3,287,939	-		Psest_3110	0.31	-0.7
3,287,939	-		Psest_3110	0.31	-1.8
3,287,939	-		Psest_3110	0.31	-0.5
3,287,939	-		Psest_3110	0.31	-0.6
3,288,223	+		Psest_3110	0.57	-0.3
3,288,321	-		Psest_3110	0.66	-0.7
3,288,321	-		Psest_3110	0.66	-2.7
3,288,321	-		Psest_3110	0.66	+0.3
3,288,514	+		Psest_3110	0.83	-0.1
3,288,692	+				-0.8
3,288,692	+				+0.5
3,288,692	+				-2.0
3,288,692	+				+0.2
3,288,692	+				+2.4
3,288,693	-				-0.8
3,288,693	-				+0.5
3,288,693	-				+0.6
3,288,693	-				-0.2
3,288,693	-				+0.1
3,288,693	-				+0.6
3,288,693	-				+1.1
3,288,693	-				+1.3
3,288,693	-				+0.5
3,288,693	-				+0.8
3,288,737	+				+0.9
3,288,738	-				-0.9
3,288,842	+		Psest_3111	0.34	+0.3
3,288,842	+		Psest_3111	0.34	+1.5
3,288,842	+		Psest_3111	0.34	-0.5
3,288,843	-		Psest_3111	0.34	-1.4
3,288,846	-		Psest_3111	0.35	-0.5
3,288,846	-		Psest_3111	0.35	-1.7
3,288,911	+		Psest_3111	0.51	-0.6
3,288,912	-		Psest_3111	0.51	-1.0
3,288,929	+		Psest_3111	0.55	-0.6
3,288,929	+		Psest_3111	0.55	-0.4
3,288,930	-		Psest_3111	0.55	-1.2
3,289,001	+		Psest_3111	0.72	+0.1
3,289,001	+		Psest_3111	0.72	-0.6
3,289,001	+		Psest_3111	0.72	+0.3
3,289,002	-		Psest_3111	0.72	-0.1
3,289,002	-		Psest_3111	0.72	-1.2
3,289,002	-		Psest_3111	0.72	+0.4
3,289,002	-		Psest_3111	0.72	+0.9
3,289,266	+				-1.2
3,289,267	-				+1.3
3,289,267	-				-0.2
3,289,267	-				+2.8
3,289,346	+				-2.3
3,289,346	+				-2.8
3,289,346	+				-1.2
3,289,346	+				-0.7
3,289,347	-				+1.1
3,289,517	+		Psest_3112	0.29	-1.0
3,289,517	+		Psest_3112	0.29	+0.5
3,289,518	-		Psest_3112	0.29	+2.9
3,289,518	-		Psest_3112	0.29	-0.7
3,289,532	+		Psest_3112	0.31	-1.0
3,289,532	+		Psest_3112	0.31	+0.3
3,289,532	+		Psest_3112	0.31	+2.3
3,289,532	+		Psest_3112	0.31	-0.8
3,289,532	+		Psest_3112	0.31	+0.4
3,289,533	-		Psest_3112	0.31	+0.4
3,289,533	-		Psest_3112	0.31	-0.4
3,289,647	-		Psest_3112	0.51	+2.9
3,289,647	-		Psest_3112	0.51	+2.5