Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2940

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
3,137,034	+		Psest_2938	0.81	-2.0
3,137,034	+		Psest_2938	0.81	+1.0
3,137,160	+		Psest_2938	0.88	+0.8
3,137,161	-		Psest_2938	0.88	-0.3
3,137,161	-		Psest_2938	0.88	+0.3
3,137,161	-		Psest_2938	0.88	-0.9
3,137,163	+		Psest_2938	0.88	+0.5
3,137,163	+		Psest_2938	0.88	+0.0
3,137,164	-		Psest_2938	0.89	-0.3
3,137,164	-		Psest_2938	0.89	+1.2
3,137,164	-		Psest_2938	0.89	-1.8
3,137,253	+				+2.6
3,137,254	-				+0.9
3,137,254	-				-0.7
3,137,254	-				+0.6
3,137,354	+				-0.3
3,137,354	+				-1.2
3,137,420	+		Psest_2939	0.21	-0.6
3,137,420	+		Psest_2939	0.21	+0.8
3,137,420	+		Psest_2939	0.21	+1.6
3,137,420	+		Psest_2939	0.21	+0.1
3,137,421	-		Psest_2939	0.22	+1.6
3,137,421	-		Psest_2939	0.22	-1.0
3,137,421	-		Psest_2939	0.22	+0.6
3,137,421	-		Psest_2939	0.22	-1.4
3,137,421	-		Psest_2939	0.22	-0.1
3,137,421	-		Psest_2939	0.22	+2.7
3,137,556	-		Psest_2939	0.64	+0.2
3,137,556	-		Psest_2939	0.64	+2.1
3,137,636	+				+2.5
3,137,636	+				-0.7
3,137,636	+				+2.6
3,137,637	-				-0.0
3,137,637	-				+0.8
3,137,637	-				+0.1
3,137,637	-				+0.6
3,137,690	+				+0.8
3,137,720	+				-1.2
3,137,831	+				-1.2
3,137,837	+				+0.9
3,137,837	+				-0.0
3,137,838	-				+0.1
3,138,003	+		Psest_2940	0.25	+0.5
3,138,003	+		Psest_2940	0.25	-0.5
3,138,004	-		Psest_2940	0.26	-0.4
3,138,004	-		Psest_2940	0.26	-0.1
3,138,078	+		Psest_2940	0.59	-1.4
3,138,078	+		Psest_2940	0.59	-1.7
3,138,168	+				-1.0
3,138,168	+				-0.0
3,138,168	+				-0.7
3,138,168	+				-0.6
3,138,168	+				+1.3
3,138,168	+				-0.9
3,138,168	+				-1.4
3,138,169	-				-2.0
3,138,169	-				+1.7
3,138,169	-				-1.1
3,138,169	-				-0.1
3,138,340	+				-2.2
3,138,371	+				+2.9
3,138,371	+				+0.7
3,138,371	+				-1.6
3,138,371	+				+2.6
3,138,371	+				-0.3
3,138,371	+				+2.8
3,138,372	-				+0.2
3,138,372	-				-0.8
3,138,372	-				+0.2
3,138,372	-				-0.3
3,138,372	-				+0.1
3,138,372	-				-1.1
3,138,372	-				+1.5
3,138,372	-				+1.8
3,138,372	-				+0.3
3,138,372	-				-0.5
3,138,372	-				-0.6
3,138,372	-				-0.5
3,138,419	-				+0.5
3,138,441	+				+0.0
3,138,441	+				-0.9
3,138,442	-				+1.2
3,138,442	-				-1.1
3,138,442	-				-0.4
3,138,442	-				+1.0
3,138,442	-				+0.1
3,138,455	+				-0.0
3,138,557	+		Psest_2941	0.14	+2.0
3,138,735	-		Psest_2941	0.28	-2.0
3,138,895	-		Psest_2941	0.40	+0.8
3,139,022	+		Psest_2941	0.50	+1.2
3,139,022	+		Psest_2941	0.50	-1.1
3,139,022	+		Psest_2941	0.50	-1.0
3,139,023	-		Psest_2941	0.50	+1.6
3,139,094	+		Psest_2941	0.56	-1.3
3,139,095	-		Psest_2941	0.56	-1.6
3,139,095	-		Psest_2941	0.56	-1.4
3,139,095	-		Psest_2941	0.56	-0.9
3,139,095	-		Psest_2941	0.56	-1.3
3,139,095	-		Psest_2941	0.56	+0.4
3,139,095	-		Psest_2941	0.56	+0.1
3,139,095	-		Psest_2941	0.56	+0.7
3,139,124	+		Psest_2941	0.58	-0.1
3,139,143	-		Psest_2941	0.59	+1.1
3,139,143	-		Psest_2941	0.59	-1.2
3,139,143	-		Psest_2941	0.59	-2.2
3,139,169	+		Psest_2941	0.61	+1.1
3,139,170	-		Psest_2941	0.62	-0.4
3,139,170	-		Psest_2941	0.62	+1.0
3,139,170	-		Psest_2941	0.62	+0.3