Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2565

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,746,570	-		Psest_2563	0.79	-0.1
2,747,017	+		Psest_2564	0.31	+0.5
2,747,018	-		Psest_2564	0.31	+0.3
2,747,018	-		Psest_2564	0.31	-0.3
2,747,057	+		Psest_2564	0.37	+1.2
2,747,062	+		Psest_2564	0.38	+0.1
2,747,063	-		Psest_2564	0.38	-0.5
2,747,063	-		Psest_2564	0.38	+1.7
2,747,063	-		Psest_2564	0.38	+1.1
2,747,063	-		Psest_2564	0.38	-1.2
2,747,063	-		Psest_2564	0.38	+0.6
2,747,063	-		Psest_2564	0.38	-0.6
2,747,063	-		Psest_2564	0.38	+1.9
2,747,063	-		Psest_2564	0.38	+1.9
2,747,063	-		Psest_2564	0.38	+1.5
2,747,063	-		Psest_2564	0.38	+2.3
2,747,159	+		Psest_2564	0.54	-0.7
2,747,160	-		Psest_2564	0.54	+0.3
2,747,160	-		Psest_2564	0.54	-0.9
2,747,244	+		Psest_2564	0.67	+0.1
2,747,425	-				+1.3
2,747,427	+				-1.1
2,747,428	-				-0.1
2,747,428	-				-0.9
2,747,428	-				+0.1
2,747,428	-				-0.4
2,747,428	-				-0.1
2,747,439	-				-0.2
2,747,495	-				-0.4
2,747,539	-				+0.2
2,747,539	-				+1.2
2,747,579	+				+0.1
2,747,579	+				+0.7
2,747,579	+				-0.5
2,747,580	-				-0.2
2,747,580	-				-2.0
2,747,583	+				-0.1
2,747,583	+				-1.5
2,747,583	+				-1.4
2,747,583	+				+3.1
2,747,583	+				+1.4
2,747,583	+				+1.4
2,747,583	+				-0.5
2,747,584	-				-0.9
2,747,584	-				+0.4
2,747,584	-				-0.9
2,747,584	-				+0.1
2,747,584	-				-1.8
2,747,584	-				-1.5
2,747,584	-				-0.1
2,747,584	-				-0.8
2,747,584	-				+0.2
2,747,584	-				-0.5
2,747,584	-				+0.2
2,747,637	+				-0.6
2,747,637	+				+0.1
2,747,637	+				-0.3
2,747,637	+				-2.3
2,747,637	+				-1.1
2,747,637	+				+1.8
2,747,638	-				-0.1
2,747,638	-				+0.9
2,747,638	-				-1.1
2,747,638	-				-1.0
2,747,638	-				+0.9
2,747,638	-				-1.6
2,747,638	-				-0.6
2,747,638	-				-1.0
2,748,071	+		Psest_2565	0.57	-0.7
2,748,166	-		Psest_2565	0.68	+0.8
2,748,166	-		Psest_2565	0.68	-0.2
2,748,330	-		Psest_2565	0.86	+2.0
2,748,376	+				+0.5
2,749,012	-		Psest_2566	0.87	-1.7
2,749,176	-				+1.8
2,749,201	+				-0.3
2,749,355	+				-1.3
2,749,355	+				+1.5
2,749,355	+				+0.8
2,749,356	-				-0.0
2,749,356	-				+0.4
2,749,356	-				-1.8
2,749,364	+				-0.5
2,749,365	-				-0.2
2,749,365	-				-1.5
2,749,365	-				-0.0
2,749,365	-				-0.8