Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2408

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,562,475	+		Psest_2406	0.87	+0.4
2,562,475	+		Psest_2406	0.87	+0.4
2,562,475	+		Psest_2406	0.87	-0.7
2,562,475	+		Psest_2406	0.87	-0.5
2,562,475	+		Psest_2406	0.87	+0.7
2,562,475	+		Psest_2406	0.87	+0.5
2,562,475	+		Psest_2406	0.87	+0.2
2,562,476	-		Psest_2406	0.87	+2.7
2,562,476	-		Psest_2406	0.87	+0.3
2,562,476	-		Psest_2406	0.87	-2.0
2,562,476	-		Psest_2406	0.87	+0.1
2,562,476	-		Psest_2406	0.87	+0.7
2,562,504	+		Psest_2406	0.88	+3.6
2,562,544	+		Psest_2406	0.90	-0.4
2,562,545	-		Psest_2406	0.90	-0.6
2,562,625	+				+0.4
2,562,625	+				+0.6
2,562,625	+				-1.2
2,562,625	+				-0.4
2,562,626	-				+1.2
2,562,626	-				+0.6
2,562,626	-				+0.2
2,562,626	-				+1.1
2,562,626	-				+2.4
2,563,071	+		Psest_2407	0.70	+0.9
2,563,071	+		Psest_2407	0.70	-0.1
2,563,071	+		Psest_2407	0.70	+1.1
2,563,071	+		Psest_2407	0.70	+1.0
2,563,071	+		Psest_2407	0.70	+0.9
2,563,072	-		Psest_2407	0.71	+2.0
2,563,072	-		Psest_2407	0.71	+1.7
2,563,072	-		Psest_2407	0.71	+1.8
2,563,114	-		Psest_2407	0.82	+0.4
2,563,358	+				-1.9
2,563,358	+				-0.1
2,563,358	+				+0.6
2,563,358	+				-0.4
2,563,359	-				-0.5
2,563,359	-				-0.5
2,563,359	-				+0.5
2,563,359	-				-0.3
2,563,359	-				+0.4
2,563,562	+		Psest_2408	0.26	+0.0
2,563,594	-		Psest_2408	0.30	-0.9
2,564,045	+		Psest_2408	0.85	+0.5
2,564,045	+		Psest_2408	0.85	-2.3
2,564,045	+		Psest_2408	0.85	-0.1
2,564,045	+		Psest_2408	0.85	+0.0
2,564,045	+		Psest_2408	0.85	+1.2
2,564,045	+		Psest_2408	0.85	+0.6
2,564,045	+		Psest_2408	0.85	+0.8
2,564,045	+		Psest_2408	0.85	-0.3
2,564,045	+		Psest_2408	0.85	+1.1
2,564,045	+		Psest_2408	0.85	+0.1
2,564,045	+		Psest_2408	0.85	+0.4
2,564,045	+		Psest_2408	0.85	+2.1
2,564,046	-		Psest_2408	0.85	+0.4
2,564,046	-		Psest_2408	0.85	-1.0
2,564,046	-		Psest_2408	0.85	+0.7
2,564,046	-		Psest_2408	0.85	+0.3
2,564,046	-		Psest_2408	0.85	-0.4
2,564,046	-		Psest_2408	0.85	-0.5
2,564,046	-		Psest_2408	0.85	+1.3
2,564,046	-		Psest_2408	0.85	+0.3
2,564,046	-		Psest_2408	0.85	-2.3
2,564,120	+				-0.5
2,564,121	-				+1.9
2,564,160	-				+2.5
2,564,160	-				+0.2
2,564,160	-				+1.0
2,564,160	-				+1.3
2,564,226	-				-1.2
2,564,429	-		Psest_2409	0.13	-0.9
2,564,429	-		Psest_2409	0.13	-0.1
2,564,551	+		Psest_2409	0.20	+1.9
2,564,552	-		Psest_2409	0.20	+0.0
2,564,552	-		Psest_2409	0.20	-0.6
2,564,552	-		Psest_2409	0.20	+0.2
2,564,552	-		Psest_2409	0.20	-0.3
2,564,626	+		Psest_2409	0.25	+0.5
2,564,627	-		Psest_2409	0.25	-0.8
2,564,698	+		Psest_2409	0.29	+0.1