Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2228

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,376,663	-		Psest_2226	0.83	+0.7
2,376,663	-		Psest_2226	0.83	-0.5
2,376,668	+		Psest_2226	0.83	+1.5
2,376,669	-		Psest_2226	0.83	+0.9
2,376,689	+		Psest_2226	0.84	-0.2
2,376,689	+		Psest_2226	0.84	+0.7
2,376,689	+		Psest_2226	0.84	+1.7
2,376,689	+		Psest_2226	0.84	+1.1
2,376,689	+		Psest_2226	0.84	-0.3
2,376,690	-		Psest_2226	0.84	-0.7
2,376,690	-		Psest_2226	0.84	-0.4
2,376,690	-		Psest_2226	0.84	+1.3
2,376,690	-		Psest_2226	0.84	+1.0
2,376,881	-				+1.0
2,376,975	-				+0.4
2,377,019	+				-0.4
2,377,020	-				+0.1
2,377,031	-				+0.9
2,377,109	-		Psest_2227	0.10	+0.6
2,377,109	-		Psest_2227	0.10	+0.4
2,377,176	+		Psest_2227	0.21	+0.9
2,377,177	-		Psest_2227	0.21	+1.7
2,377,177	-		Psest_2227	0.21	+0.3
2,377,177	-		Psest_2227	0.21	-0.2
2,377,177	-		Psest_2227	0.21	+1.6
2,377,177	-		Psest_2227	0.21	-0.0
2,377,180	+		Psest_2227	0.22	-1.2
2,377,509	+		Psest_2227	0.75	+0.7
2,377,509	+		Psest_2227	0.75	+1.4
2,377,509	+		Psest_2227	0.75	-1.2
2,377,509	+		Psest_2227	0.75	+1.7
2,377,509	+		Psest_2227	0.75	+0.9
2,377,509	+		Psest_2227	0.75	+2.8
2,377,510	-		Psest_2227	0.75	+0.1
2,377,510	-		Psest_2227	0.75	+0.0
2,377,510	-		Psest_2227	0.75	+3.1
2,377,510	-		Psest_2227	0.75	-0.6
2,377,510	-		Psest_2227	0.75	+2.1
2,377,510	-		Psest_2227	0.75	+0.3
2,377,510	-		Psest_2227	0.75	+1.4
2,377,510	-		Psest_2227	0.75	-0.9
2,377,562	+		Psest_2227	0.83	+1.1
2,377,563	-		Psest_2227	0.84	+1.1
2,377,730	+				+0.6
2,377,770	-				-1.2
2,378,065	-		Psest_2228	0.31	-0.2
2,378,095	-		Psest_2228	0.33	+1.4
2,378,225	-		Psest_2228	0.43	-1.1
2,378,297	+		Psest_2228	0.49	+0.4
2,378,297	+		Psest_2228	0.49	+1.8
2,378,297	+		Psest_2228	0.49	-0.4
2,378,297	+		Psest_2228	0.49	+0.3
2,378,297	+		Psest_2228	0.49	+0.0
2,378,297	+		Psest_2228	0.49	+1.1
2,378,297	+		Psest_2228	0.49	+0.3
2,378,297	+		Psest_2228	0.49	-0.8
2,378,297	+		Psest_2228	0.49	-1.7
2,378,298	-		Psest_2228	0.49	-0.5
2,378,298	-		Psest_2228	0.49	-0.2
2,378,298	-		Psest_2228	0.49	+0.1
2,378,298	-		Psest_2228	0.49	+0.2
2,378,369	-		Psest_2228	0.54	+0.2
2,378,397	+		Psest_2228	0.57	+0.5
2,378,462	+		Psest_2228	0.62	-0.1
2,378,462	+		Psest_2228	0.62	+0.1
2,378,462	+		Psest_2228	0.62	+0.5
2,378,462	+		Psest_2228	0.62	-1.1
2,378,463	-		Psest_2228	0.62	+0.7
2,378,463	-		Psest_2228	0.62	+1.5
2,378,513	+		Psest_2228	0.66	-1.0
2,378,513	+		Psest_2228	0.66	+1.8
2,378,513	+		Psest_2228	0.66	-1.8
2,378,513	+		Psest_2228	0.66	+0.6
2,378,514	-		Psest_2228	0.66	-0.6
2,378,514	-		Psest_2228	0.66	+0.1
2,378,514	-		Psest_2228	0.66	+1.1
2,378,514	-		Psest_2228	0.66	-0.2
2,378,572	+		Psest_2228	0.70	-0.4
2,378,572	+		Psest_2228	0.70	-1.4
2,378,572	+		Psest_2228	0.70	-1.7
2,378,576	+		Psest_2228	0.70	-2.0
2,378,576	+		Psest_2228	0.70	-1.3
2,378,576	+		Psest_2228	0.70	-0.5
2,378,576	+		Psest_2228	0.70	-0.4
2,378,577	-		Psest_2228	0.71	-0.2
2,378,577	-		Psest_2228	0.71	-1.3
2,378,577	-		Psest_2228	0.71	+1.6
2,378,577	-		Psest_2228	0.71	+1.1
2,378,577	-		Psest_2228	0.71	+0.5
2,378,798	+		Psest_2228	0.88	+2.8
2,378,798	+		Psest_2228	0.88	+2.0
2,378,798	+		Psest_2228	0.88	+0.5
2,378,798	+		Psest_2228	0.88	-1.7
2,378,798	+		Psest_2228	0.88	-0.3
2,378,799	-		Psest_2228	0.88	-0.9
2,378,799	-		Psest_2228	0.88	-0.6
2,378,799	-		Psest_2228	0.88	+0.3
2,378,799	-		Psest_2228	0.88	-0.7
2,378,875	+				-0.9
2,378,875	+				-1.1
2,378,876	-				+0.3
2,378,876	-				+0.1
2,378,876	-				+0.3
2,378,876	-				+0.2
2,378,887	-				+0.2
2,378,887	-				+0.5
2,378,887	-				+0.8
2,378,929	+				-2.1
2,378,930	-				+0.3
2,378,930	-				-0.1
2,378,958	+				+3.0
2,378,958	+				-1.4
2,378,958	+				+0.3
2,378,973	+				+0.0
2,378,974	-				-0.6
2,378,975	+				+0.5
2,378,975	+				+1.0
2,378,975	+				+0.1
2,378,975	+				-0.3
2,378,975	+				-1.3
2,378,975	+				-1.2
2,379,066	+				-2.5
2,379,067	-				+0.6
2,379,086	+				+0.6
2,379,086	+				+0.4
2,379,200	+				+0.1
2,379,200	+				-2.1
2,379,201	-				+1.8
2,379,201	-				+0.3
2,379,202	+				-0.4
2,379,202	+				+1.0
2,379,202	+				-1.4
2,379,202	+				+1.2
2,379,202	+				+1.1
2,379,202	+				-0.9
2,379,202	+				+0.5
2,379,202	+				-0.0
2,379,202	+				+0.7
2,379,202	+				+0.6
2,379,202	+				+1.2
2,379,202	+				+2.7
2,379,203	-				-0.5
2,379,203	-				+1.3
2,379,203	-				+0.2
2,379,203	-				+0.2
2,379,203	-				+1.8
2,379,203	-				-0.4
2,379,203	-				-0.7
2,379,203	-				+0.2
2,379,287	+				+0.2
2,379,288	-				-1.1
2,379,323	-				+1.4
2,379,326	-				+0.5
2,379,326	-				+1.6
2,379,527	+		Psest_2229	0.33	+3.8
2,379,711	+		Psest_2229	0.70	+0.2
2,379,711	+		Psest_2229	0.70	+1.6
2,379,712	-		Psest_2229	0.70	+0.3
2,379,712	-		Psest_2229	0.70	+0.6
2,379,712	-		Psest_2229	0.70	+0.7
2,379,907	-				+1.4