Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2173

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,329,672	+		Psest_2172	0.55	+1.3
2,329,787	+		Psest_2172	0.63	+0.9
2,329,788	-		Psest_2172	0.63	+0.8
2,329,810	+		Psest_2172	0.64	+0.4
2,329,810	+		Psest_2172	0.64	+0.4
2,329,810	+		Psest_2172	0.64	+1.1
2,329,810	+		Psest_2172	0.64	-0.1
2,329,810	+		Psest_2172	0.64	-0.8
2,329,810	+		Psest_2172	0.64	+2.4
2,329,810	+		Psest_2172	0.64	-0.0
2,329,811	-		Psest_2172	0.64	-0.5
2,329,811	-		Psest_2172	0.64	-0.3
2,330,011	+		Psest_2172	0.77	+0.3
2,330,011	+		Psest_2172	0.77	+0.3
2,330,011	+		Psest_2172	0.77	-0.4
2,330,011	+		Psest_2172	0.77	-0.9
2,330,011	+		Psest_2172	0.77	-1.0
2,330,012	-		Psest_2172	0.77	-0.8
2,330,012	-		Psest_2172	0.77	+2.1
2,330,012	-		Psest_2172	0.77	-0.2
2,330,012	-		Psest_2172	0.77	+0.2
2,330,012	-		Psest_2172	0.77	+0.0
2,330,012	-		Psest_2172	0.77	-0.1
2,330,012	-		Psest_2172	0.77	+0.3
2,330,012	-		Psest_2172	0.77	-0.2
2,330,071	+		Psest_2172	0.81	+0.3
2,330,072	-		Psest_2172	0.81	+0.8
2,330,072	-		Psest_2172	0.81	-0.2
2,330,360	+				+0.7
2,330,412	-				+1.4
2,330,419	+				-0.1
2,330,420	-				+0.0
2,330,420	-				+0.2
2,330,420	-				+0.4
2,330,420	-				+0.4
2,330,429	-				-0.4
2,330,429	-				+1.0
2,330,429	-				-1.6
2,330,454	+				+0.2
2,330,454	+				-1.3
2,330,454	+				-0.6
2,330,454	+				-0.6
2,330,454	+				+0.5
2,330,454	+				-0.2
2,330,454	+				+0.1
2,330,454	+				+1.7
2,330,454	+				+2.8
2,330,454	+				+0.8
2,330,455	-				-0.0
2,330,455	-				+1.4
2,330,455	-				+0.6
2,330,455	-				+0.2
2,330,474	+				-0.3
2,330,475	-				+1.0
2,330,475	-				+1.4
2,330,618	-				+0.4
2,330,618	-				+0.0
2,330,737	+		Psest_2173	0.14	-0.2
2,330,772	+		Psest_2173	0.21	-0.6
2,330,772	+		Psest_2173	0.21	+0.1
2,330,772	+		Psest_2173	0.21	-0.5
2,330,813	+		Psest_2173	0.29	+0.8
2,330,813	+		Psest_2173	0.29	+3.2
2,330,814	-		Psest_2173	0.29	+0.4
2,330,814	-		Psest_2173	0.29	-0.9
2,331,002	+		Psest_2173	0.66	-0.3
2,331,003	-		Psest_2173	0.66	-1.8
2,331,102	-		Psest_2173	0.86	+1.1
2,331,128	+				+0.8
2,331,138	+				+0.6
2,331,138	+				-1.5
2,331,170	+				+1.7
2,331,221	-				-0.2
2,331,319	+		Psest_2174	0.14	-0.8
2,331,413	+		Psest_2174	0.22	+1.8
2,331,413	+		Psest_2174	0.22	-0.9
2,331,435	-		Psest_2174	0.24	-0.3
2,331,435	-		Psest_2174	0.24	+1.8
2,331,435	-		Psest_2174	0.24	-0.5
2,331,515	+		Psest_2174	0.32	+0.4
2,331,516	-		Psest_2174	0.32	-0.1
2,331,516	-		Psest_2174	0.32	+0.4
2,331,577	-		Psest_2174	0.37	-0.3
2,331,577	-		Psest_2174	0.37	+0.6
2,331,577	-		Psest_2174	0.37	+1.1
2,331,577	-		Psest_2174	0.37	+0.0
2,331,577	-		Psest_2174	0.37	-0.8
2,331,627	+		Psest_2174	0.42	+0.6
2,331,627	+		Psest_2174	0.42	+0.9
2,331,627	+		Psest_2174	0.42	+0.1
2,331,627	+		Psest_2174	0.42	+2.0
2,331,627	+		Psest_2174	0.42	+2.6
2,331,627	+		Psest_2174	0.42	+0.4
2,331,627	+		Psest_2174	0.42	+1.0
2,331,627	+		Psest_2174	0.42	+2.0
2,331,627	+		Psest_2174	0.42	+0.8
2,331,627	+		Psest_2174	0.42	+0.2
2,331,627	+		Psest_2174	0.42	-2.3
2,331,627	+		Psest_2174	0.42	-1.0
2,331,627	+		Psest_2174	0.42	+1.2
2,331,628	-		Psest_2174	0.42	+0.8
2,331,628	-		Psest_2174	0.42	+0.0
2,331,628	-		Psest_2174	0.42	+0.7
2,331,628	-		Psest_2174	0.42	+0.6
2,331,628	-		Psest_2174	0.42	-1.0
2,331,628	-		Psest_2174	0.42	-0.4
2,331,628	-		Psest_2174	0.42	+1.6
2,331,628	-		Psest_2174	0.42	+0.9
2,331,628	-		Psest_2174	0.42	+0.6
2,332,031	-		Psest_2174	0.79	+2.2
2,332,052	+		Psest_2174	0.81	-0.1
2,332,080	-		Psest_2174	0.84	+0.1
2,332,106	+		Psest_2174	0.86	+0.6
2,332,106	+		Psest_2174	0.86	+0.2
2,332,106	+		Psest_2174	0.86	-0.1
2,332,107	-		Psest_2174	0.86	+1.7
2,332,107	-		Psest_2174	0.86	-0.5
2,332,107	-		Psest_2174	0.86	-1.2