Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1969

Experiment: Nalidixic 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_1968 and Psest_1969 overlap by 1 nucleotidesPsest_1969 and Psest_1971 are separated by 284 nucleotidesPsest_1971 and Psest_1972 are separated by 165 nucleotides Psest_1968: Psest_1968 - threonyl-tRNA synthetase, at 2,081,658 to 2,083,580 _1968 Psest_1969: Psest_1969 - translation initiation factor IF-3, at 2,083,580 to 2,084,131 _1969 Psest_1971: Psest_1971 - ribosomal protein L20, at 2,084,416 to 2,084,772 _1971 Psest_1972: Psest_1972 - phenylalanyl-tRNA synthetase, alpha subunit, at 2,084,938 to 2,085,954 _1972 Position (kb) 2083 2084 2085Strain fitness (log2 ratio) -1 0 1 2at 2084.166 kb on + strandat 2084.166 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml
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2,084,166 + +2.7
2,084,166 + +0.4

Or see this region's nucleotide sequence