Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1727

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,832,301	+		Psest_1725	0.78	+1.0
1,832,301	+		Psest_1725	0.78	+0.1
1,832,301	+		Psest_1725	0.78	+0.8
1,832,322	+		Psest_1725	0.79	+0.3
1,832,323	-		Psest_1725	0.79	-0.3
1,832,323	-		Psest_1725	0.79	-1.9
1,832,323	-		Psest_1725	0.79	+0.8
1,832,323	-		Psest_1725	0.79	+0.8
1,832,397	+		Psest_1725	0.84	+0.4
1,832,400	+		Psest_1725	0.84	+1.8
1,832,400	+		Psest_1725	0.84	-0.1
1,832,400	+		Psest_1725	0.84	-1.2
1,832,400	+		Psest_1725	0.84	-1.7
1,832,400	+		Psest_1725	0.84	-0.5
1,832,401	-		Psest_1725	0.84	-0.7
1,832,401	-		Psest_1725	0.84	-0.6
1,832,401	-		Psest_1725	0.84	-0.8
1,832,401	-		Psest_1725	0.84	+1.1
1,832,401	-		Psest_1725	0.84	-1.7
1,832,401	-		Psest_1725	0.84	-0.9
1,832,442	+		Psest_1725	0.86	-0.1
1,832,442	+		Psest_1725	0.86	+0.5
1,832,442	+		Psest_1725	0.86	+1.0
1,832,442	+		Psest_1725	0.86	+0.4
1,832,443	-		Psest_1725	0.86	-0.3
1,832,673	+				-2.0
1,832,673	+				+0.1
1,833,079	-				+0.3
1,833,126	+				-0.8
1,834,659	-				-0.1
1,834,665	+				-0.4
1,834,666	-				+0.9
1,834,677	+				+1.8
1,834,677	+				+0.3
1,834,678	-				-0.9
1,834,678	-				-2.0
1,834,811	+		Psest_1728	0.20	-0.0
1,834,926	+		Psest_1728	0.41	-1.2
1,834,927	-		Psest_1728	0.42	+1.0
1,834,927	-		Psest_1728	0.42	+1.4
1,834,930	+		Psest_1728	0.42	-0.6
1,834,931	-		Psest_1728	0.42	-0.2
1,834,931	-		Psest_1728	0.42	+0.4
1,834,931	-		Psest_1728	0.42	+2.3
1,834,988	-		Psest_1728	0.53	-1.7
1,834,988	-		Psest_1728	0.53	-0.0
1,834,988	-		Psest_1728	0.53	+0.4
1,834,988	-		Psest_1728	0.53	-0.3
1,835,052	+		Psest_1728	0.65	-1.4
1,835,052	+		Psest_1728	0.65	-0.5
1,835,053	-		Psest_1728	0.65	-0.1
1,835,053	-		Psest_1728	0.65	-0.0
1,835,236	+				-0.8
1,835,236	+				-1.7
1,835,237	-				-1.0
1,835,237	-				-1.0