Experiment: Nalidixic 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1394 and Psest_1395 are separated by 10 nucleotides Psest_1395 and Psest_1396 are separated by 122 nucleotides Psest_1396 and Psest_1397 are separated by 36 nucleotides Psest_1397 and Psest_1398 overlap by 56 nucleotides
Psest_1394: Psest_1394 - Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit, at 1,503,364 to 1,503,804
_1394
Psest_1395: Psest_1395 - Short-chain alcohol dehydrogenase of unknown specificity, at 1,503,815 to 1,504,552
_1395
Psest_1396: Psest_1396 - Cytosine/adenosine deaminases, at 1,504,675 to 1,505,145
_1396
Psest_1397: Psest_1397 - ABC-type nitrate/sulfonate/bicarbonate transport system, permease component, at 1,505,182 to 1,506,018
_1397
Psest_1398: Psest_1398 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 1,505,963 to 1,506,766
_1398
Position (kb) 1504
1505
1506 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1503.820 kb on - strand at 1503.885 kb on + strand at 1503.885 kb on + strand at 1503.886 kb on - strand at 1504.075 kb on - strand, within Psest_1395 at 1504.090 kb on - strand, within Psest_1395 at 1504.116 kb on + strand, within Psest_1395 at 1504.454 kb on + strand, within Psest_1395 at 1504.454 kb on + strand, within Psest_1395 at 1504.455 kb on - strand, within Psest_1395 at 1504.527 kb on - strand at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.910 kb on + strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1504.911 kb on - strand, within Psest_1396 at 1505.009 kb on + strand, within Psest_1396 at 1505.009 kb on + strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.010 kb on - strand, within Psest_1396 at 1505.166 kb on + strand at 1505.166 kb on + strand at 1505.436 kb on - strand, within Psest_1397 at 1505.456 kb on + strand, within Psest_1397 at 1505.778 kb on + strand, within Psest_1397 at 1505.778 kb on + strand, within Psest_1397 at 1505.779 kb on - strand, within Psest_1397 at 1505.779 kb on - strand, within Psest_1397
Per-strain Table
Position Strand Gene LocusTag Fraction Nalidixic 0.00390625 mg/ml remove 1,503,820 - -1.3 1,503,885 + -0.6 1,503,885 + -0.4 1,503,886 - -0.3 1,504,075 - Psest_1395 0.35 +0.6 1,504,090 - Psest_1395 0.37 +0.2 1,504,116 + Psest_1395 0.41 -2.0 1,504,454 + Psest_1395 0.87 -0.5 1,504,454 + Psest_1395 0.87 +1.5 1,504,455 - Psest_1395 0.87 -0.2 1,504,527 - +0.9 1,504,910 + Psest_1396 0.50 +1.1 1,504,910 + Psest_1396 0.50 -0.0 1,504,910 + Psest_1396 0.50 +0.7 1,504,910 + Psest_1396 0.50 -0.7 1,504,910 + Psest_1396 0.50 +0.5 1,504,910 + Psest_1396 0.50 -1.0 1,504,910 + Psest_1396 0.50 +0.6 1,504,910 + Psest_1396 0.50 -0.8 1,504,910 + Psest_1396 0.50 -0.2 1,504,910 + Psest_1396 0.50 +1.1 1,504,910 + Psest_1396 0.50 +1.6 1,504,910 + Psest_1396 0.50 +1.1 1,504,911 - Psest_1396 0.50 +0.4 1,504,911 - Psest_1396 0.50 +0.3 1,504,911 - Psest_1396 0.50 -0.4 1,504,911 - Psest_1396 0.50 -0.3 1,504,911 - Psest_1396 0.50 +0.9 1,504,911 - Psest_1396 0.50 +0.1 1,504,911 - Psest_1396 0.50 +0.0 1,504,911 - Psest_1396 0.50 +1.7 1,504,911 - Psest_1396 0.50 +1.3 1,504,911 - Psest_1396 0.50 -1.2 1,504,911 - Psest_1396 0.50 -1.3 1,505,009 + Psest_1396 0.71 -0.4 1,505,009 + Psest_1396 0.71 +1.3 1,505,010 - Psest_1396 0.71 -0.1 1,505,010 - Psest_1396 0.71 +1.6 1,505,010 - Psest_1396 0.71 -0.9 1,505,010 - Psest_1396 0.71 -0.3 1,505,010 - Psest_1396 0.71 -0.1 1,505,010 - Psest_1396 0.71 +0.8 1,505,010 - Psest_1396 0.71 +2.7 1,505,010 - Psest_1396 0.71 +2.4 1,505,166 + -0.5 1,505,166 + +0.9 1,505,436 - Psest_1397 0.30 -0.0 1,505,456 + Psest_1397 0.33 -0.7 1,505,778 + Psest_1397 0.71 +0.1 1,505,778 + Psest_1397 0.71 +0.0 1,505,779 - Psest_1397 0.71 +0.8 1,505,779 - Psest_1397 0.71 -0.9
Or see this region's nucleotide sequence