Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1376

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,485,716	+		Psest_1375	0.56	+0.6
1,485,716	+		Psest_1375	0.56	-1.7
1,485,716	+		Psest_1375	0.56	+0.8
1,485,717	-		Psest_1375	0.56	-1.0
1,485,717	-		Psest_1375	0.56	-1.7
1,486,309	+		Psest_1375	0.85	-0.6
1,486,404	+				-1.0
1,486,405	-				+0.5
1,486,405	-				+1.1
1,486,812	+		Psest_1376	0.44	+0.8
1,486,812	+		Psest_1376	0.44	-0.7
1,486,812	+		Psest_1376	0.44	-0.2
1,486,812	+		Psest_1376	0.44	-1.5
1,486,812	+		Psest_1376	0.44	+1.1
1,486,812	+		Psest_1376	0.44	-1.6
1,486,813	-		Psest_1376	0.44	+2.6
1,486,813	-		Psest_1376	0.44	+0.6
1,486,813	-		Psest_1376	0.44	-0.9
1,486,813	-		Psest_1376	0.44	+0.4
1,486,822	+		Psest_1376	0.47	+0.4
1,486,822	+		Psest_1376	0.47	-1.6
1,486,822	+		Psest_1376	0.47	-1.1
1,486,822	+		Psest_1376	0.47	-1.7
1,486,822	+		Psest_1376	0.47	+0.7
1,486,823	-		Psest_1376	0.47	+0.7
1,486,823	-		Psest_1376	0.47	-1.5
1,486,823	-		Psest_1376	0.47	-1.5
1,486,823	-		Psest_1376	0.47	+2.0
1,486,823	-		Psest_1376	0.47	+0.4
1,486,823	-		Psest_1376	0.47	-0.2
1,486,823	-		Psest_1376	0.47	+0.4
1,486,869	+		Psest_1376	0.60	-1.6
1,486,885	+		Psest_1376	0.65	+1.1
1,486,895	-		Psest_1376	0.68	-0.5
1,486,961	+		Psest_1376	0.86	-0.9
1,486,961	+		Psest_1376	0.86	-1.7
1,486,986	+				+1.2
1,486,987	-				-0.5
1,486,987	-				+0.7
1,486,987	-				-1.3
1,487,102	+				+0.6
1,487,102	+				-1.9
1,487,102	+				-1.1
1,487,102	+				+1.6
1,487,102	+				-0.7
1,487,103	-				+0.0
1,487,103	-				+0.2
1,487,103	-				-0.1
1,487,103	-				+0.5
1,487,103	-				-0.4
1,487,240	+		Psest_1377	0.24	+1.5
1,487,240	+		Psest_1377	0.24	+0.6
1,487,240	+		Psest_1377	0.24	-0.4
1,487,240	+		Psest_1377	0.24	+2.4
1,487,240	+		Psest_1377	0.24	-1.5
1,487,261	+		Psest_1377	0.27	+2.1
1,487,261	+		Psest_1377	0.27	-1.0
1,487,262	-		Psest_1377	0.27	+0.4
1,487,282	+		Psest_1377	0.30	-1.1
1,487,283	-		Psest_1377	0.30	+1.8
1,487,283	-		Psest_1377	0.30	+1.3
1,487,497	-		Psest_1377	0.62	+1.5
1,487,634	-		Psest_1377	0.82	-1.1
1,487,753	+				-1.8
1,487,753	+				+0.8
1,487,753	+				+0.2
1,487,753	+				-2.4
1,487,753	+				-1.3
1,487,753	+				+0.2
1,487,753	+				-0.7
1,487,753	+				-0.1
1,487,753	+				-0.3
1,487,753	+				-0.5
1,487,754	-				+0.0
1,487,754	-				-0.1
1,487,754	-				-0.8
1,487,754	-				+1.2
1,487,754	-				-1.8
1,487,754	-				+1.4
1,487,754	-				+2.5
1,487,757	+				+0.6
1,487,758	-				-0.4
1,487,849	+		Psest_1378	0.11	-0.1
1,487,849	+		Psest_1378	0.11	+2.6
1,487,849	+		Psest_1378	0.11	+1.3
1,487,849	+		Psest_1378	0.11	-0.7
1,487,849	+		Psest_1378	0.11	+0.5
1,487,849	+		Psest_1378	0.11	-0.2
1,487,849	+		Psest_1378	0.11	+1.2
1,487,850	-		Psest_1378	0.11	+0.2
1,487,850	-		Psest_1378	0.11	+2.9
1,487,850	-		Psest_1378	0.11	+0.7
1,487,921	-		Psest_1378	0.21	-0.5