Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1170

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,271,270	-		Psest_1169	0.66	-0.3
1,271,270	-		Psest_1169	0.66	-1.5
1,271,283	-		Psest_1169	0.67	-0.9
1,271,285	+		Psest_1169	0.67	+1.7
1,271,285	+		Psest_1169	0.67	-0.1
1,271,286	-		Psest_1169	0.67	-0.7
1,271,339	-		Psest_1169	0.70	+1.8
1,271,444	-		Psest_1169	0.75	+0.2
1,271,444	-		Psest_1169	0.75	-1.2
1,271,446	+		Psest_1169	0.75	-0.3
1,271,446	+		Psest_1169	0.75	+0.9
1,271,447	-		Psest_1169	0.75	-0.1
1,271,486	-		Psest_1169	0.77	-1.0
1,271,581	+		Psest_1169	0.82	+1.9
1,271,581	+		Psest_1169	0.82	-0.7
1,271,582	-		Psest_1169	0.82	+0.1
1,271,582	-		Psest_1169	0.82	-0.2
1,271,582	-		Psest_1169	0.82	-1.1
1,271,582	-		Psest_1169	0.82	+1.3
1,271,582	-		Psest_1169	0.82	-0.1
1,271,707	+		Psest_1169	0.89	-1.5
1,271,707	+		Psest_1169	0.89	-0.9
1,271,707	+		Psest_1169	0.89	+2.3
1,271,707	+		Psest_1169	0.89	-1.5
1,271,707	+		Psest_1169	0.89	+2.2
1,271,707	+		Psest_1169	0.89	-0.1
1,271,707	+		Psest_1169	0.89	+0.9
1,271,708	-		Psest_1169	0.89	+0.1
1,271,708	-		Psest_1169	0.89	-1.0
1,271,708	-		Psest_1169	0.89	+0.5
1,271,708	-		Psest_1169	0.89	+2.5
1,272,004	+				+1.6
1,272,004	+				-2.3
1,272,004	+				-1.0
1,272,004	+				-1.1
1,272,004	+				-0.2
1,272,004	+				+0.4
1,272,004	+				-0.6
1,272,004	+				+0.3
1,272,004	+				+0.1
1,272,005	-				-0.5
1,272,005	-				-1.6
1,272,005	-				-0.5
1,272,005	-				-1.5
1,272,005	-				-1.8
1,272,005	-				+0.9
1,272,005	-				+0.4
1,272,005	-				-0.9
1,272,006	+				+2.1
1,272,007	-				-0.3
1,272,081	+				-1.1
1,272,082	-				+1.7
1,272,177	+				+0.8
1,272,262	-				-1.0
1,272,262	-				-0.9
1,272,595	+		Psest_1170	0.28	+2.5
1,272,620	+		Psest_1170	0.30	+0.6
1,272,620	+		Psest_1170	0.30	-0.5
1,272,621	-		Psest_1170	0.30	-0.1
1,272,627	+		Psest_1170	0.30	-0.4
1,272,627	+		Psest_1170	0.30	+0.0
1,272,627	+		Psest_1170	0.30	-0.4
1,272,627	+		Psest_1170	0.30	+0.6
1,272,627	+		Psest_1170	0.30	+4.2
1,272,627	+		Psest_1170	0.30	-1.2
1,272,627	+		Psest_1170	0.30	-1.5
1,272,627	+		Psest_1170	0.30	+1.6
1,272,627	+		Psest_1170	0.30	-0.4
1,272,627	+		Psest_1170	0.30	-1.1
1,272,628	-		Psest_1170	0.30	+2.4
1,272,628	-		Psest_1170	0.30	+0.0
1,272,628	-		Psest_1170	0.30	+0.3
1,272,628	-		Psest_1170	0.30	+0.1
1,272,628	-		Psest_1170	0.30	-0.1
1,272,628	-		Psest_1170	0.30	-1.5
1,272,628	-		Psest_1170	0.30	+0.5
1,272,629	+		Psest_1170	0.31	-0.1
1,272,629	+		Psest_1170	0.31	+0.7
1,272,807	+		Psest_1170	0.45	-1.6
1,272,808	-		Psest_1170	0.46	-2.5
1,272,938	+		Psest_1170	0.56	+0.1
1,272,939	-		Psest_1170	0.57	-1.5
1,273,295	+		Psest_1170	0.86	+0.6
1,273,372	-				+0.0
1,273,530	+				+1.2
1,273,530	+				-0.3
1,273,530	+				+0.6
1,273,530	+				+0.0
1,273,530	+				+0.3
1,273,530	+				-0.1
1,273,531	-				-1.5
1,273,531	-				+0.1
1,273,534	+				-0.3
1,273,534	+				-0.5
1,273,534	+				-0.3
1,273,535	-				-0.2
1,273,535	-				-0.3
1,273,535	-				-0.3
1,273,660	+		Psest_1171	0.14	+0.1
1,273,660	+		Psest_1171	0.14	+1.9
1,273,715	+		Psest_1171	0.18	-0.3
1,273,715	+		Psest_1171	0.18	-0.1
1,273,715	+		Psest_1171	0.18	-0.8
1,273,716	-		Psest_1171	0.18	-0.1
1,273,716	-		Psest_1171	0.18	-1.0
1,273,716	-		Psest_1171	0.18	-0.4
1,273,872	+		Psest_1171	0.31	-0.8
1,273,873	-		Psest_1171	0.31	+0.6
1,274,270	+		Psest_1171	0.64	-0.8
1,274,297	+		Psest_1171	0.67	+1.7
1,274,297	+		Psest_1171	0.67	-1.4
1,274,457	+		Psest_1171	0.80	-1.2