Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3344

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
3,508,227	+		Psest_3342	0.30	-0.8
3,508,227	+		Psest_3342	0.30	-1.2
3,508,227	+		Psest_3342	0.30	-0.1
3,508,228	-		Psest_3342	0.30	+0.2
3,508,228	-		Psest_3342	0.30	+0.8
3,508,228	-		Psest_3342	0.30	-0.1
3,508,228	-		Psest_3342	0.30	-2.5
3,508,228	-		Psest_3342	0.30	+0.1
3,508,340	+		Psest_3342	0.49	+0.6
3,508,340	+		Psest_3342	0.49	-1.0
3,508,341	-		Psest_3342	0.49	+0.1
3,508,341	-		Psest_3342	0.49	+1.6
3,508,341	-		Psest_3342	0.49	-0.2
3,508,341	-		Psest_3342	0.49	+1.4
3,508,341	-		Psest_3342	0.49	+0.1
3,508,341	-		Psest_3342	0.49	-0.8
3,508,341	-		Psest_3342	0.49	+0.5
3,508,410	-		Psest_3342	0.61	-0.9
3,508,410	-		Psest_3342	0.61	-1.2
3,508,440	-		Psest_3342	0.66	-0.4
3,508,577	-		Psest_3342	0.89	+1.8
3,508,577	-		Psest_3342	0.89	-1.2
3,508,605	+				-0.4
3,508,605	+				+1.2
3,508,606	-				-0.1
3,508,657	+				-1.6
3,508,701	-				+0.6
3,508,766	+		Psest_3343	0.22	+2.6
3,508,766	+		Psest_3343	0.22	+0.1
3,508,767	-		Psest_3343	0.23	+0.7
3,508,767	-		Psest_3343	0.23	-1.5
3,508,767	-		Psest_3343	0.23	+1.0
3,508,767	-		Psest_3343	0.23	-0.6
3,508,767	-		Psest_3343	0.23	-0.8
3,508,767	-		Psest_3343	0.23	+0.9
3,508,826	+		Psest_3343	0.34	+1.8
3,509,333	-		Psest_3344	0.18	-0.7
3,509,345	+		Psest_3344	0.19	+0.5
3,509,499	+		Psest_3344	0.37	+1.2
3,509,511	-		Psest_3344	0.38	-1.5
3,509,511	-		Psest_3344	0.38	-0.5
3,509,533	+		Psest_3344	0.41	+0.3
3,509,533	+		Psest_3344	0.41	-0.8
3,509,533	+		Psest_3344	0.41	-1.5
3,509,533	+		Psest_3344	0.41	-1.1
3,509,533	+		Psest_3344	0.41	-2.4
3,509,534	-		Psest_3344	0.41	+0.5
3,509,534	-		Psest_3344	0.41	-0.6
3,509,534	-		Psest_3344	0.41	+0.5
3,509,534	-		Psest_3344	0.41	-1.3
3,509,534	-		Psest_3344	0.41	+1.2
3,509,534	-		Psest_3344	0.41	-1.1
3,509,720	+		Psest_3344	0.62	+0.4
3,509,720	+		Psest_3344	0.62	-1.0
3,509,720	+		Psest_3344	0.62	-0.2
3,509,721	-		Psest_3344	0.62	+1.2
3,509,721	-		Psest_3344	0.62	+0.9
3,509,721	-		Psest_3344	0.62	+0.8
3,509,950	+		Psest_3344	0.88	+1.1
3,509,950	+		Psest_3344	0.88	-1.1
3,509,951	-		Psest_3344	0.88	-0.3
3,509,951	-		Psest_3344	0.88	-1.9
3,509,951	-		Psest_3344	0.88	-1.0
3,509,951	-		Psest_3344	0.88	-2.1
3,509,951	-		Psest_3344	0.88	-1.3
3,509,951	-		Psest_3344	0.88	+0.1
3,509,951	-		Psest_3344	0.88	-0.8
3,510,019	+				+0.2
3,510,020	-				-0.3
3,510,055	+				+2.0
3,510,197	+				-0.8
3,510,248	-				-0.6
3,510,265	+				-0.3
3,510,266	-				-0.8
3,510,266	-				-1.2
3,510,285	-				-0.3
3,510,304	-				-0.7
3,510,304	-				+0.9
3,510,334	+		Psest_3345	0.12	+0.5
3,510,334	+		Psest_3345	0.12	-2.8
3,510,334	+		Psest_3345	0.12	+1.8
3,510,334	+		Psest_3345	0.12	-0.8
3,510,334	+		Psest_3345	0.12	+0.4
3,510,334	+		Psest_3345	0.12	+0.5
3,510,334	+		Psest_3345	0.12	+0.7
3,510,334	+		Psest_3345	0.12	-0.6
3,510,334	+		Psest_3345	0.12	+0.1
3,510,335	-		Psest_3345	0.12	+1.2
3,510,335	-		Psest_3345	0.12	+0.9
3,510,335	-		Psest_3345	0.12	-2.3
3,510,335	-		Psest_3345	0.12	+0.7
3,510,335	-		Psest_3345	0.12	+0.8
3,510,335	-		Psest_3345	0.12	-1.2
3,510,335	-		Psest_3345	0.12	-1.7
3,510,365	-		Psest_3345	0.14	-0.7
3,510,365	-		Psest_3345	0.14	-0.1
3,510,365	-		Psest_3345	0.14	+1.1
3,510,484	+		Psest_3345	0.22	+0.1
3,510,484	+		Psest_3345	0.22	-0.1
3,510,484	+		Psest_3345	0.22	-0.7
3,510,485	-		Psest_3345	0.22	+0.8
3,510,485	-		Psest_3345	0.22	+0.2
3,510,485	-		Psest_3345	0.22	-2.0
3,510,568	+		Psest_3345	0.27	-0.9
3,510,568	+		Psest_3345	0.27	+1.8
3,510,779	-		Psest_3345	0.41	+0.5
3,510,839	+		Psest_3345	0.45	-0.6