Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3239

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
3,409,653	-				+1.3
3,409,653	-				+0.5
3,409,653	-				+0.1
3,409,653	-				+0.1
3,409,653	-				+0.8
3,409,684	-				+0.2
3,410,011	-		Psest_3239	0.11	-0.9
3,410,011	-		Psest_3239	0.11	-1.0
3,410,011	-		Psest_3239	0.11	-1.5
3,410,011	-		Psest_3239	0.11	-1.0
3,410,011	-		Psest_3239	0.11	+0.6
3,410,011	-		Psest_3239	0.11	-1.4
3,410,048	-		Psest_3239	0.24	-1.1
3,410,360	+				+0.7
3,410,360	+				-0.1
3,410,360	+				+0.3
3,410,360	+				+0.5
3,410,360	+				-1.6
3,410,361	-				-0.4
3,410,361	-				-0.0
3,410,361	-				-1.2
3,410,361	-				-0.7
3,410,361	-				-1.3
3,410,369	-				-1.5
3,410,402	+				+1.1
3,410,402	+				-1.4
3,410,439	+				-1.5
3,410,440	-				+2.0
3,410,625	+				+2.8
3,410,625	+				-0.1
3,410,633	-		Psest_3240	0.10	-1.8
3,410,937	+		Psest_3240	0.28	+0.5
3,410,937	+		Psest_3240	0.28	+0.2
3,410,937	+		Psest_3240	0.28	-0.5
3,410,938	-		Psest_3240	0.28	-0.3
3,410,938	-		Psest_3240	0.28	+0.8
3,410,938	-		Psest_3240	0.28	+0.5
3,411,055	+		Psest_3240	0.35	-1.5
3,411,055	+		Psest_3240	0.35	-1.3
3,411,153	+		Psest_3240	0.40	-1.0
3,411,154	-		Psest_3240	0.40	-0.9