Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0146

Experiment: Spectinomycin 0.00625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.00625 mg/ml
143,407	+				+0.2
143,408	-				-0.3
143,409	+				-0.2
143,409	+				+0.7
143,409	+				+0.3
143,410	-				-0.1
143,410	-				+0.8
143,410	-				-1.6
143,410	-				+0.6
143,841	+		Psest_0145	0.50	-0.5
143,842	-		Psest_0145	0.50	-2.1
143,842	-		Psest_0145	0.50	-0.5
143,937	+		Psest_0145	0.59	+0.4
143,938	-		Psest_0145	0.59	+1.2
143,938	-		Psest_0145	0.59	-1.9
144,133	-		Psest_0145	0.77	+0.6
144,136	-		Psest_0145	0.77	+0.2
144,575	+				+1.4
144,647	+		Psest_0146	0.12	+1.1
144,647	+		Psest_0146	0.12	+2.4
145,076	-		Psest_0146	0.31	+2.5
145,076	-		Psest_0146	0.31	+1.8
145,076	-		Psest_0146	0.31	-1.7
145,112	+		Psest_0146	0.33	+2.4
145,112	+		Psest_0146	0.33	-1.6
145,113	-		Psest_0146	0.33	+2.8
145,255	+		Psest_0146	0.39	-0.8
146,030	+		Psest_0146	0.74	-1.1
146,031	-		Psest_0146	0.74	-0.9
146,031	-		Psest_0146	0.74	+0.9
146,057	+		Psest_0146	0.76	+1.2
146,058	-		Psest_0146	0.76	+0.3
146,058	-		Psest_0146	0.76	+2.7
146,058	-		Psest_0146	0.76	+2.3
146,498	+				+1.1
146,498	+				-0.1
146,498	+				-0.9
146,498	+				+0.1
146,498	+				-1.1
146,498	+				+0.9
146,498	+				+0.1
146,499	-				+0.9
146,499	-				-0.6
146,499	-				+1.4
146,615	+				+1.2
146,615	+				-0.4
146,615	+				-0.2
146,615	+				+0.5
146,615	+				-1.1
146,615	+				-1.7
146,615	+				+0.5
146,615	+				+0.9
146,615	+				+0.3
146,616	-				+0.7
146,616	-				-1.4
146,616	-				-1.3
146,642	+				-0.5
146,643	-				-2.6
146,643	-				+2.2
146,644	+				-1.1
146,644	+				+0.6
146,644	+				-0.7
146,795	-				+0.9
147,087	-		Psest_0147	0.74	+2.1
147,091	+		Psest_0147	0.75	+0.2
147,091	+		Psest_0147	0.75	-0.9
147,092	-		Psest_0147	0.75	+0.3
147,124	+		Psest_0147	0.83	-0.7
147,124	+		Psest_0147	0.83	-0.2
147,124	+		Psest_0147	0.83	+2.1
147,125	-		Psest_0147	0.83	-0.8
147,125	-		Psest_0147	0.83	+0.2
147,125	-		Psest_0147	0.83	+1.0
147,125	-		Psest_0147	0.83	+0.5
147,125	-		Psest_0147	0.83	+0.6
147,125	-		Psest_0147	0.83	-0.2
147,145	-		Psest_0147	0.88	+0.5
147,181	+				+1.3
147,181	+				-1.3
147,181	+				+4.1
147,182	-				+1.7
147,231	+				-2.0
147,338	+				+1.5
147,338	+				+0.2
147,339	-				+1.0
147,339	-				+2.8
147,339	-				-2.1