Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3677 and Psest_3678 are separated by 75 nucleotides Psest_3678 and Psest_3679 are separated by 14 nucleotides Psest_3679 and Psest_3680 are separated by 196 nucleotides Psest_3680 and Psest_3681 are separated by 138 nucleotides
Psest_3677: Psest_3677 - dihydroneopterin aldolase, at 3,841,887 to 3,842,240
_3677
Psest_3678: Psest_3678 - acyl-phosphate glycerol 3-phosphate acyltransferase, at 3,842,316 to 3,842,885
_3678
Psest_3679: Psest_3679 - putative glycoprotease GCP, at 3,842,900 to 3,843,925
_3679
Psest_3680: Psest_3680 - ribosomal protein S21, at 3,844,122 to 3,844,337
_3680
Psest_3681: Psest_3681 - DNA primase, catalytic core, at 3,844,476 to 3,846,419
_3681
Position (kb)
3842
3843
3844 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.441 kb on + strand, within Psest_3678 at 3842.516 kb on - strand, within Psest_3678 at 3842.601 kb on + strand, within Psest_3678 at 3842.602 kb on - strand, within Psest_3678 at 3842.822 kb on + strand, within Psest_3678 at 3842.822 kb on + strand, within Psest_3678 at 3842.823 kb on - strand, within Psest_3678 at 3842.823 kb on - strand, within Psest_3678 at 3842.823 kb on - strand, within Psest_3678 at 3844.396 kb on + strand at 3844.461 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 3,842,441 + Psest_3678 0.22 -2.0 3,842,441 + Psest_3678 0.22 +1.3 3,842,441 + Psest_3678 0.22 +0.4 3,842,441 + Psest_3678 0.22 +1.1 3,842,441 + Psest_3678 0.22 +1.1 3,842,441 + Psest_3678 0.22 +1.9 3,842,516 - Psest_3678 0.35 +2.4 3,842,601 + Psest_3678 0.50 +1.2 3,842,602 - Psest_3678 0.50 -1.1 3,842,822 + Psest_3678 0.89 -0.1 3,842,822 + Psest_3678 0.89 +1.6 3,842,823 - Psest_3678 0.89 +2.5 3,842,823 - Psest_3678 0.89 -0.9 3,842,823 - Psest_3678 0.89 +1.7 3,844,396 + -0.6 3,844,461 + -0.2
Or see this region's nucleotide sequence