Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3660 and Psest_3661 are separated by 96 nucleotides Psest_3661 and Psest_3662 are separated by 7 nucleotides Psest_3662 and Psest_3663 are separated by 1 nucleotides
Psest_3660: Psest_3660 - PAS domain S-box, at 3,821,198 to 3,823,615
_3660
Psest_3661: Psest_3661 - Protein of unknown function (DUF3530)., at 3,823,712 to 3,824,725
_3661
Psest_3662: Psest_3662 - DnaJ-domain-containing proteins 1, at 3,824,733 to 3,825,500
_3662
Psest_3663: Psest_3663 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 3,825,502 to 3,826,173
_3663
Position (kb)
3823
3824
3825 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3822.811 kb on - strand, within Psest_3660 at 3823.050 kb on + strand, within Psest_3660 at 3823.050 kb on + strand, within Psest_3660 at 3823.118 kb on - strand, within Psest_3660 at 3823.125 kb on + strand, within Psest_3660 at 3823.125 kb on + strand, within Psest_3660 at 3823.194 kb on + strand, within Psest_3660 at 3823.194 kb on + strand, within Psest_3660 at 3823.194 kb on + strand, within Psest_3660 at 3823.194 kb on + strand, within Psest_3660 at 3823.194 kb on + strand, within Psest_3660 at 3823.195 kb on - strand, within Psest_3660 at 3823.269 kb on + strand, within Psest_3660 at 3823.461 kb on + strand at 3823.461 kb on + strand at 3823.471 kb on - strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.615 kb on + strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.616 kb on - strand at 3823.617 kb on + strand at 3823.617 kb on + strand at 3823.617 kb on + strand at 3823.617 kb on + strand at 3823.617 kb on + strand at 3823.617 kb on + strand at 3823.618 kb on - strand at 3823.618 kb on - strand at 3823.618 kb on - strand at 3823.618 kb on - strand at 3823.618 kb on - strand at 3823.618 kb on - strand at 3823.654 kb on + strand at 3823.654 kb on + strand at 3823.654 kb on + strand at 3823.654 kb on + strand at 3823.654 kb on + strand at 3823.654 kb on + strand at 3823.655 kb on - strand at 3823.655 kb on - strand at 3823.772 kb on + strand at 3823.772 kb on + strand at 3823.772 kb on + strand at 3823.773 kb on - strand at 3824.156 kb on - strand, within Psest_3661 at 3824.220 kb on + strand, within Psest_3661 at 3824.220 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.290 kb on - strand, within Psest_3661 at 3824.417 kb on + strand, within Psest_3661 at 3824.473 kb on + strand, within Psest_3661 at 3824.473 kb on + strand, within Psest_3661 at 3824.474 kb on - strand, within Psest_3661 at 3824.474 kb on - strand, within Psest_3661 at 3824.507 kb on + strand, within Psest_3661 at 3824.507 kb on + strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.532 kb on + strand, within Psest_3661 at 3824.532 kb on + strand, within Psest_3661 at 3824.533 kb on - strand, within Psest_3661 at 3824.533 kb on - strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.545 kb on + strand, within Psest_3661 at 3824.545 kb on + strand, within Psest_3661 at 3824.546 kb on - strand, within Psest_3661 at 3824.664 kb on - strand at 3824.711 kb on - strand at 3824.711 kb on - strand at 3824.723 kb on + strand at 3824.724 kb on - strand at 3824.858 kb on + strand, within Psest_3662 at 3824.859 kb on - strand, within Psest_3662 at 3824.859 kb on - strand, within Psest_3662 at 3824.942 kb on - strand, within Psest_3662 at 3825.267 kb on - strand, within Psest_3662 at 3825.520 kb on + strand at 3825.520 kb on + strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3825.521 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 3,822,811 - Psest_3660 0.67 +0.9 3,823,050 + Psest_3660 0.77 -1.2 3,823,050 + Psest_3660 0.77 -1.2 3,823,118 - Psest_3660 0.79 +1.2 3,823,125 + Psest_3660 0.80 +2.0 3,823,125 + Psest_3660 0.80 +1.1 3,823,194 + Psest_3660 0.83 -0.9 3,823,194 + Psest_3660 0.83 +1.3 3,823,194 + Psest_3660 0.83 -2.2 3,823,194 + Psest_3660 0.83 +0.0 3,823,194 + Psest_3660 0.83 -0.2 3,823,195 - Psest_3660 0.83 +1.1 3,823,269 + Psest_3660 0.86 -3.5 3,823,461 + -2.5 3,823,461 + +0.4 3,823,471 - -0.0 3,823,615 + -0.4 3,823,615 + -0.2 3,823,615 + -1.8 3,823,615 + -1.7 3,823,615 + -1.9 3,823,615 + -3.0 3,823,615 + +1.2 3,823,615 + +0.9 3,823,615 + -0.4 3,823,615 + -3.8 3,823,615 + -0.7 3,823,615 + -1.0 3,823,615 + -0.3 3,823,615 + -1.5 3,823,616 - -0.2 3,823,616 - +1.3 3,823,616 - +1.0 3,823,616 - +1.6 3,823,616 - -1.4 3,823,616 - +0.9 3,823,616 - +2.3 3,823,616 - -0.2 3,823,616 - +0.8 3,823,616 - +0.6 3,823,616 - -2.2 3,823,617 + -0.9 3,823,617 + +2.1 3,823,617 + -2.0 3,823,617 + +1.1 3,823,617 + -0.5 3,823,617 + -1.0 3,823,618 - -1.0 3,823,618 - -0.5 3,823,618 - +0.6 3,823,618 - +0.8 3,823,618 - -1.8 3,823,618 - -1.1 3,823,654 + -1.8 3,823,654 + +0.2 3,823,654 + +0.5 3,823,654 + +0.6 3,823,654 + -1.1 3,823,654 + -1.0 3,823,655 - +1.6 3,823,655 - -2.8 3,823,772 + +0.1 3,823,772 + -1.3 3,823,772 + -0.6 3,823,773 - -0.3 3,824,156 - Psest_3661 0.44 -1.9 3,824,220 + Psest_3661 0.50 -1.4 3,824,220 + Psest_3661 0.50 -1.2 3,824,289 + Psest_3661 0.57 +1.1 3,824,289 + Psest_3661 0.57 +3.2 3,824,289 + Psest_3661 0.57 +0.2 3,824,289 + Psest_3661 0.57 +1.3 3,824,290 - Psest_3661 0.57 +1.1 3,824,417 + Psest_3661 0.70 +2.7 3,824,473 + Psest_3661 0.75 -2.6 3,824,473 + Psest_3661 0.75 +1.3 3,824,474 - Psest_3661 0.75 -1.0 3,824,474 - Psest_3661 0.75 -0.6 3,824,507 + Psest_3661 0.78 +0.1 3,824,507 + Psest_3661 0.78 +0.4 3,824,508 - Psest_3661 0.79 -0.1 3,824,508 - Psest_3661 0.79 +1.3 3,824,508 - Psest_3661 0.79 -1.4 3,824,508 - Psest_3661 0.79 -1.0 3,824,532 + Psest_3661 0.81 -1.1 3,824,532 + Psest_3661 0.81 -0.2 3,824,533 - Psest_3661 0.81 +2.3 3,824,533 - Psest_3661 0.81 +0.9 3,824,543 + Psest_3661 0.82 +2.1 3,824,543 + Psest_3661 0.82 +1.8 3,824,543 + Psest_3661 0.82 +1.1 3,824,543 + Psest_3661 0.82 +0.9 3,824,543 + Psest_3661 0.82 -0.5 3,824,543 + Psest_3661 0.82 -0.4 3,824,543 + Psest_3661 0.82 +0.4 3,824,543 + Psest_3661 0.82 +0.4 3,824,543 + Psest_3661 0.82 -0.5 3,824,543 + Psest_3661 0.82 +1.1 3,824,543 + Psest_3661 0.82 -1.5 3,824,543 + Psest_3661 0.82 +2.8 3,824,543 + Psest_3661 0.82 -0.9 3,824,543 + Psest_3661 0.82 +1.3 3,824,543 + Psest_3661 0.82 +1.4 3,824,543 + Psest_3661 0.82 +0.7 3,824,543 + Psest_3661 0.82 +0.8 3,824,543 + Psest_3661 0.82 -1.0 3,824,544 - Psest_3661 0.82 +0.6 3,824,544 - Psest_3661 0.82 -1.9 3,824,544 - Psest_3661 0.82 -2.1 3,824,544 - Psest_3661 0.82 +2.4 3,824,544 - Psest_3661 0.82 -0.3 3,824,544 - Psest_3661 0.82 +1.0 3,824,544 - Psest_3661 0.82 -0.2 3,824,544 - Psest_3661 0.82 -1.1 3,824,544 - Psest_3661 0.82 +0.5 3,824,544 - Psest_3661 0.82 +0.7 3,824,544 - Psest_3661 0.82 +0.7 3,824,545 + Psest_3661 0.82 -0.5 3,824,545 + Psest_3661 0.82 +0.8 3,824,546 - Psest_3661 0.82 +3.0 3,824,664 - -0.3 3,824,711 - -0.6 3,824,711 - +0.9 3,824,723 + +1.1 3,824,724 - +0.4 3,824,858 + Psest_3662 0.16 -0.9 3,824,859 - Psest_3662 0.16 -0.3 3,824,859 - Psest_3662 0.16 -1.1 3,824,942 - Psest_3662 0.27 -0.5 3,825,267 - Psest_3662 0.70 -1.7 3,825,520 + -2.1 3,825,520 + -1.6 3,825,521 - -0.1 3,825,521 - -0.0 3,825,521 - -1.5 3,825,521 - -0.2 3,825,521 - +0.8
Or see this region's nucleotide sequence