Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1497 and Psest_1498 are separated by 51 nucleotides Psest_1498 and Psest_1499 are separated by 2 nucleotides Psest_1499 and Psest_1500 are separated by 11 nucleotides Psest_1500 and Psest_1501 overlap by 1 nucleotides
Psest_1497: Psest_1497 - Holliday junction DNA helicase, RuvB subunit, at 1,598,766 to 1,599,818
_1497
Psest_1498: Psest_1498 - tol-pal system-associated acyl-CoA thioesterase, at 1,599,870 to 1,600,313
_1498
Psest_1499: Psest_1499 - TolQ protein, at 1,600,316 to 1,601,008
_1499
Psest_1500: Psest_1500 - TolR protein, at 1,601,020 to 1,601,460
_1500
Psest_1501: Psest_1501 - TolA protein, at 1,601,460 to 1,602,461
_1501
Position (kb) 1600
1601
1602 Strain fitness (log2 ratio) -1
0
1 at 1599.446 kb on - strand, within Psest_1497 at 1599.811 kb on + strand at 1599.866 kb on + strand at 1599.869 kb on + strand at 1599.869 kb on + strand at 1599.869 kb on + strand at 1599.921 kb on + strand, within Psest_1498 at 1599.951 kb on + strand, within Psest_1498 at 1599.954 kb on + strand, within Psest_1498 at 1599.963 kb on + strand, within Psest_1498 at 1600.180 kb on + strand, within Psest_1498
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 1,599,446 - Psest_1497 0.65 -0.6 1,599,811 + +0.9 1,599,866 + -1.6 1,599,869 + +1.4 1,599,869 + +0.1 1,599,869 + -0.5 1,599,921 + Psest_1498 0.11 -0.2 1,599,951 + Psest_1498 0.18 -0.5 1,599,954 + Psest_1498 0.19 +0.3 1,599,963 + Psest_1498 0.21 -1.1 1,600,180 + Psest_1498 0.70 -0.3
Or see this region's nucleotide sequence