Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1478 and Psest_1479 overlap by 8 nucleotides Psest_1479 and Psest_1480 overlap by 4 nucleotides Psest_1480 and Psest_1481 are separated by 126 nucleotides
Psest_1478: Psest_1478 - Predicted membrane protein, at 1,583,093 to 1,583,503
_1478
Psest_1479: Psest_1479 - NAD(P)H:quinone oxidoreductase, type IV, at 1,583,496 to 1,584,101
_1479
Psest_1480: Psest_1480 - arsenate reductase (glutaredoxin), at 1,584,098 to 1,584,484
_1480
Psest_1481: Psest_1481 - Predicted membrane protein, at 1,584,611 to 1,585,843
_1481
Position (kb)
1584
1585 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.142 kb on + strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.143 kb on - strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.196 kb on + strand, within Psest_1478 at 1583.197 kb on - strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.244 kb on + strand, within Psest_1478 at 1583.257 kb on + strand, within Psest_1478 at 1583.378 kb on + strand, within Psest_1478 at 1583.488 kb on + strand at 1583.489 kb on - strand at 1583.667 kb on - strand, within Psest_1479 at 1583.667 kb on - strand, within Psest_1479 at 1583.669 kb on - strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.833 kb on + strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.834 kb on - strand, within Psest_1479 at 1583.921 kb on - strand, within Psest_1479 at 1584.070 kb on + strand at 1584.071 kb on - strand at 1584.073 kb on + strand at 1584.073 kb on + strand at 1584.073 kb on + strand at 1584.073 kb on + strand at 1584.074 kb on - strand at 1584.074 kb on - strand at 1584.074 kb on - strand at 1584.074 kb on - strand at 1584.074 kb on - strand at 1584.088 kb on + strand at 1584.088 kb on + strand at 1584.089 kb on - strand at 1584.089 kb on - strand at 1584.089 kb on - strand at 1584.089 kb on - strand at 1584.089 kb on - strand at 1584.089 kb on - strand at 1584.256 kb on - strand, within Psest_1480 at 1584.256 kb on - strand, within Psest_1480 at 1584.439 kb on + strand, within Psest_1480 at 1584.440 kb on - strand, within Psest_1480 at 1584.455 kb on + strand at 1584.455 kb on + strand at 1584.456 kb on - strand at 1584.456 kb on - strand at 1584.456 kb on - strand at 1584.456 kb on - strand at 1584.456 kb on - strand at 1584.456 kb on - strand at 1584.456 kb on - strand at 1584.487 kb on + strand at 1584.556 kb on + strand at 1584.556 kb on + strand at 1584.556 kb on + strand at 1584.556 kb on + strand at 1584.556 kb on + strand at 1584.557 kb on - strand at 1584.557 kb on - strand at 1584.557 kb on - strand at 1584.565 kb on - strand at 1584.707 kb on + strand at 1584.806 kb on + strand, within Psest_1481 at 1584.807 kb on - strand, within Psest_1481 at 1584.807 kb on - strand, within Psest_1481 at 1584.807 kb on - strand, within Psest_1481 at 1584.807 kb on - strand, within Psest_1481 at 1584.807 kb on - strand, within Psest_1481 at 1584.807 kb on - strand, within Psest_1481 at 1584.808 kb on + strand, within Psest_1481 at 1584.809 kb on - strand, within Psest_1481 at 1584.854 kb on + strand, within Psest_1481 at 1584.854 kb on + strand, within Psest_1481 at 1584.854 kb on + strand, within Psest_1481 at 1584.855 kb on - strand, within Psest_1481 at 1584.964 kb on + strand, within Psest_1481 at 1584.964 kb on + strand, within Psest_1481 at 1584.965 kb on - strand, within Psest_1481 at 1584.965 kb on - strand, within Psest_1481 at 1585.013 kb on + strand, within Psest_1481 at 1585.013 kb on + strand, within Psest_1481 at 1585.014 kb on - strand, within Psest_1481 at 1585.014 kb on - strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.073 kb on + strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.074 kb on - strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.181 kb on + strand, within Psest_1481 at 1585.182 kb on - strand, within Psest_1481 at 1585.182 kb on - strand, within Psest_1481 at 1585.182 kb on - strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.283 kb on + strand, within Psest_1481 at 1585.284 kb on - strand, within Psest_1481 at 1585.284 kb on - strand, within Psest_1481 at 1585.284 kb on - strand, within Psest_1481 at 1585.284 kb on - strand, within Psest_1481 at 1585.284 kb on - strand, within Psest_1481 at 1585.293 kb on - strand, within Psest_1481 at 1585.316 kb on + strand, within Psest_1481 at 1585.358 kb on + strand, within Psest_1481 at 1585.358 kb on + strand, within Psest_1481 at 1585.358 kb on + strand, within Psest_1481 at 1585.358 kb on + strand, within Psest_1481 at 1585.358 kb on + strand, within Psest_1481 at 1585.359 kb on - strand, within Psest_1481 at 1585.407 kb on + strand, within Psest_1481 at 1585.429 kb on + strand, within Psest_1481
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 1,583,142 + Psest_1478 0.12 -0.0 1,583,142 + Psest_1478 0.12 -0.2 1,583,142 + Psest_1478 0.12 -1.2 1,583,142 + Psest_1478 0.12 +0.1 1,583,142 + Psest_1478 0.12 -1.8 1,583,142 + Psest_1478 0.12 -2.0 1,583,143 - Psest_1478 0.12 -2.4 1,583,143 - Psest_1478 0.12 -0.5 1,583,143 - Psest_1478 0.12 -0.2 1,583,143 - Psest_1478 0.12 +0.2 1,583,143 - Psest_1478 0.12 -0.5 1,583,143 - Psest_1478 0.12 -0.2 1,583,143 - Psest_1478 0.12 +3.1 1,583,143 - Psest_1478 0.12 -0.6 1,583,143 - Psest_1478 0.12 -0.4 1,583,196 + Psest_1478 0.25 -3.1 1,583,196 + Psest_1478 0.25 -1.2 1,583,196 + Psest_1478 0.25 +0.1 1,583,196 + Psest_1478 0.25 -0.9 1,583,197 - Psest_1478 0.25 +0.6 1,583,244 + Psest_1478 0.37 +0.5 1,583,244 + Psest_1478 0.37 +0.9 1,583,244 + Psest_1478 0.37 +0.1 1,583,244 + Psest_1478 0.37 -1.6 1,583,257 + Psest_1478 0.40 +0.9 1,583,378 + Psest_1478 0.69 -0.6 1,583,488 + +1.6 1,583,489 - +1.0 1,583,667 - Psest_1479 0.28 +2.1 1,583,667 - Psest_1479 0.28 +1.9 1,583,669 - Psest_1479 0.29 -0.8 1,583,833 + Psest_1479 0.56 -0.5 1,583,833 + Psest_1479 0.56 -0.1 1,583,833 + Psest_1479 0.56 -1.3 1,583,834 - Psest_1479 0.56 +2.0 1,583,834 - Psest_1479 0.56 -1.7 1,583,834 - Psest_1479 0.56 +1.8 1,583,921 - Psest_1479 0.70 +0.3 1,584,070 + +1.0 1,584,071 - -0.2 1,584,073 + +0.6 1,584,073 + +1.4 1,584,073 + -1.2 1,584,073 + -0.8 1,584,074 - +0.8 1,584,074 - +1.8 1,584,074 - -1.7 1,584,074 - -1.0 1,584,074 - -1.4 1,584,088 + -0.3 1,584,088 + -1.4 1,584,089 - -1.2 1,584,089 - +1.3 1,584,089 - -0.5 1,584,089 - -0.5 1,584,089 - -0.8 1,584,089 - -0.6 1,584,256 - Psest_1480 0.41 -2.5 1,584,256 - Psest_1480 0.41 -0.2 1,584,439 + Psest_1480 0.88 -0.8 1,584,440 - Psest_1480 0.88 +0.1 1,584,455 + +0.5 1,584,455 + +0.1 1,584,456 - -1.1 1,584,456 - -0.2 1,584,456 - +1.0 1,584,456 - -0.9 1,584,456 - +3.6 1,584,456 - -0.1 1,584,456 - +0.8 1,584,487 + -2.2 1,584,556 + +1.4 1,584,556 + -0.5 1,584,556 + -0.6 1,584,556 + -0.6 1,584,556 + +0.1 1,584,557 - -0.3 1,584,557 - -0.3 1,584,557 - -0.5 1,584,565 - -1.7 1,584,707 + -0.9 1,584,806 + Psest_1481 0.16 -1.2 1,584,807 - Psest_1481 0.16 -2.0 1,584,807 - Psest_1481 0.16 +0.5 1,584,807 - Psest_1481 0.16 +0.2 1,584,807 - Psest_1481 0.16 -1.3 1,584,807 - Psest_1481 0.16 +2.4 1,584,807 - Psest_1481 0.16 -2.4 1,584,808 + Psest_1481 0.16 +0.3 1,584,809 - Psest_1481 0.16 +0.6 1,584,854 + Psest_1481 0.20 -2.6 1,584,854 + Psest_1481 0.20 +0.6 1,584,854 + Psest_1481 0.20 -1.8 1,584,855 - Psest_1481 0.20 +0.2 1,584,964 + Psest_1481 0.29 +0.1 1,584,964 + Psest_1481 0.29 -0.2 1,584,965 - Psest_1481 0.29 +0.5 1,584,965 - Psest_1481 0.29 +1.3 1,585,013 + Psest_1481 0.33 +0.7 1,585,013 + Psest_1481 0.33 -1.1 1,585,014 - Psest_1481 0.33 +1.2 1,585,014 - Psest_1481 0.33 +0.8 1,585,073 + Psest_1481 0.37 -0.9 1,585,073 + Psest_1481 0.37 +0.6 1,585,073 + Psest_1481 0.37 +1.2 1,585,073 + Psest_1481 0.37 +1.9 1,585,073 + Psest_1481 0.37 +0.6 1,585,073 + Psest_1481 0.37 +1.6 1,585,073 + Psest_1481 0.37 +1.6 1,585,073 + Psest_1481 0.37 +0.3 1,585,073 + Psest_1481 0.37 +1.1 1,585,073 + Psest_1481 0.37 -0.2 1,585,073 + Psest_1481 0.37 -0.5 1,585,074 - Psest_1481 0.38 +1.0 1,585,074 - Psest_1481 0.38 +1.3 1,585,074 - Psest_1481 0.38 +1.0 1,585,074 - Psest_1481 0.38 -0.3 1,585,074 - Psest_1481 0.38 +1.4 1,585,074 - Psest_1481 0.38 +0.2 1,585,074 - Psest_1481 0.38 +3.0 1,585,181 + Psest_1481 0.46 -1.3 1,585,181 + Psest_1481 0.46 +0.2 1,585,181 + Psest_1481 0.46 +1.0 1,585,181 + Psest_1481 0.46 +0.8 1,585,181 + Psest_1481 0.46 +0.7 1,585,181 + Psest_1481 0.46 +1.4 1,585,181 + Psest_1481 0.46 -0.1 1,585,181 + Psest_1481 0.46 -1.4 1,585,181 + Psest_1481 0.46 -2.0 1,585,182 - Psest_1481 0.46 -0.9 1,585,182 - Psest_1481 0.46 +1.5 1,585,182 - Psest_1481 0.46 -1.4 1,585,283 + Psest_1481 0.55 -1.8 1,585,283 + Psest_1481 0.55 +0.3 1,585,283 + Psest_1481 0.55 +0.2 1,585,283 + Psest_1481 0.55 +2.6 1,585,283 + Psest_1481 0.55 -0.2 1,585,283 + Psest_1481 0.55 +1.7 1,585,283 + Psest_1481 0.55 +2.5 1,585,284 - Psest_1481 0.55 +2.2 1,585,284 - Psest_1481 0.55 -1.0 1,585,284 - Psest_1481 0.55 +1.5 1,585,284 - Psest_1481 0.55 +1.4 1,585,284 - Psest_1481 0.55 +0.5 1,585,293 - Psest_1481 0.55 -0.9 1,585,316 + Psest_1481 0.57 -2.1 1,585,358 + Psest_1481 0.61 -1.8 1,585,358 + Psest_1481 0.61 -1.0 1,585,358 + Psest_1481 0.61 +0.7 1,585,358 + Psest_1481 0.61 -1.9 1,585,358 + Psest_1481 0.61 +0.9 1,585,359 - Psest_1481 0.61 +1.3 1,585,407 + Psest_1481 0.65 +0.9 1,585,429 + Psest_1481 0.66 -0.9
Or see this region's nucleotide sequence