Experiment: Benzethonium chloride 0.01 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2107 and Psest_2108 are separated by 222 nucleotides Psest_2108 and Psest_2109 are separated by 105 nucleotides Psest_2109 and Psest_2110 are separated by 100 nucleotides Psest_2110 and Psest_2111 are separated by 142 nucleotides
Psest_2107: Psest_2107 - Topoisomerase IB, at 2,237,436 to 2,238,380
_2107
Psest_2108: Psest_2108 - hypothetical protein, at 2,238,603 to 2,238,767
_2108
Psest_2109: Psest_2109 - Predicted membrane protein, at 2,238,873 to 2,239,565
_2109
Psest_2110: Psest_2110 - hypothetical protein, at 2,239,666 to 2,239,947
_2110
Psest_2111: Psest_2111 - hypothetical protein, at 2,240,090 to 2,240,359
_2111
Position (kb)
2238
2239
2240 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2237.888 kb on + strand, within Psest_2107 at 2237.889 kb on - strand, within Psest_2107 at 2237.963 kb on + strand, within Psest_2107 at 2237.983 kb on + strand, within Psest_2107 at 2237.984 kb on - strand, within Psest_2107 at 2237.984 kb on - strand, within Psest_2107 at 2238.157 kb on + strand, within Psest_2107 at 2238.157 kb on + strand, within Psest_2107 at 2238.157 kb on + strand, within Psest_2107 at 2238.270 kb on + strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.271 kb on - strand, within Psest_2107 at 2238.280 kb on + strand, within Psest_2107 at 2238.291 kb on + strand at 2238.358 kb on + strand at 2238.358 kb on + strand at 2238.358 kb on + strand at 2238.359 kb on - strand at 2238.359 kb on - strand at 2238.415 kb on + strand at 2238.415 kb on + strand at 2238.416 kb on - strand at 2238.416 kb on - strand at 2238.416 kb on - strand at 2238.416 kb on - strand at 2238.562 kb on - strand at 2238.604 kb on + strand at 2238.604 kb on + strand at 2238.608 kb on + strand at 2238.832 kb on - strand at 2238.864 kb on + strand at 2238.871 kb on + strand at 2238.871 kb on + strand at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.988 kb on + strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2238.989 kb on - strand, within Psest_2109 at 2239.027 kb on + strand, within Psest_2109 at 2239.047 kb on + strand, within Psest_2109 at 2239.047 kb on + strand, within Psest_2109 at 2239.048 kb on - strand, within Psest_2109 at 2239.048 kb on - strand, within Psest_2109 at 2239.048 kb on - strand, within Psest_2109 at 2239.213 kb on + strand, within Psest_2109 at 2239.213 kb on + strand, within Psest_2109 at 2239.213 kb on + strand, within Psest_2109 at 2239.214 kb on - strand, within Psest_2109 at 2239.214 kb on - strand, within Psest_2109 at 2239.214 kb on - strand, within Psest_2109 at 2239.214 kb on - strand, within Psest_2109 at 2239.361 kb on - strand, within Psest_2109 at 2239.628 kb on + strand at 2239.629 kb on - strand at 2239.629 kb on - strand at 2239.681 kb on + strand at 2239.682 kb on - strand at 2239.769 kb on + strand, within Psest_2110 at 2239.769 kb on + strand, within Psest_2110 at 2239.769 kb on + strand, within Psest_2110 at 2239.769 kb on + strand, within Psest_2110 at 2239.769 kb on + strand, within Psest_2110 at 2239.769 kb on + strand, within Psest_2110 at 2239.769 kb on + strand, within Psest_2110 at 2239.770 kb on - strand, within Psest_2110 at 2239.770 kb on - strand, within Psest_2110 at 2239.770 kb on - strand, within Psest_2110 at 2239.928 kb on + strand at 2239.929 kb on - strand at 2240.022 kb on - strand at 2240.022 kb on - strand at 2240.390 kb on + strand at 2240.422 kb on - strand at 2240.422 kb on - strand at 2240.422 kb on - strand at 2240.548 kb on + strand at 2240.549 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.01 mM remove 2,237,888 + Psest_2107 0.48 -1.4 2,237,889 - Psest_2107 0.48 -2.0 2,237,963 + Psest_2107 0.56 -1.8 2,237,983 + Psest_2107 0.58 +0.8 2,237,984 - Psest_2107 0.58 +0.1 2,237,984 - Psest_2107 0.58 -0.4 2,238,157 + Psest_2107 0.76 -0.5 2,238,157 + Psest_2107 0.76 -0.9 2,238,157 + Psest_2107 0.76 +0.0 2,238,270 + Psest_2107 0.88 -0.9 2,238,271 - Psest_2107 0.88 +1.9 2,238,271 - Psest_2107 0.88 -0.0 2,238,271 - Psest_2107 0.88 -0.5 2,238,271 - Psest_2107 0.88 -1.1 2,238,280 + Psest_2107 0.89 -0.5 2,238,291 + -0.9 2,238,358 + +0.4 2,238,358 + -1.2 2,238,358 + +1.0 2,238,359 - -1.9 2,238,359 - -2.3 2,238,415 + -0.5 2,238,415 + +0.8 2,238,416 - +0.7 2,238,416 - -0.2 2,238,416 - +3.3 2,238,416 - +0.4 2,238,562 - +2.2 2,238,604 + -1.1 2,238,604 + +0.7 2,238,608 + +0.9 2,238,832 - -0.2 2,238,864 + +1.7 2,238,871 + +0.9 2,238,871 + -0.7 2,238,988 + Psest_2109 0.17 -0.6 2,238,988 + Psest_2109 0.17 +1.4 2,238,988 + Psest_2109 0.17 -1.1 2,238,988 + Psest_2109 0.17 -0.8 2,238,988 + Psest_2109 0.17 -0.4 2,238,988 + Psest_2109 0.17 -1.1 2,238,988 + Psest_2109 0.17 -1.1 2,238,988 + Psest_2109 0.17 -1.6 2,238,988 + Psest_2109 0.17 +0.4 2,238,989 - Psest_2109 0.17 +0.3 2,238,989 - Psest_2109 0.17 -1.3 2,238,989 - Psest_2109 0.17 +1.7 2,238,989 - Psest_2109 0.17 +0.8 2,238,989 - Psest_2109 0.17 +0.3 2,238,989 - Psest_2109 0.17 +0.3 2,238,989 - Psest_2109 0.17 -0.4 2,238,989 - Psest_2109 0.17 +0.4 2,238,989 - Psest_2109 0.17 -0.2 2,238,989 - Psest_2109 0.17 +1.2 2,238,989 - Psest_2109 0.17 -1.1 2,238,989 - Psest_2109 0.17 -0.3 2,239,027 + Psest_2109 0.22 -0.8 2,239,047 + Psest_2109 0.25 -0.9 2,239,047 + Psest_2109 0.25 -2.1 2,239,048 - Psest_2109 0.25 -2.4 2,239,048 - Psest_2109 0.25 -0.9 2,239,048 - Psest_2109 0.25 +0.1 2,239,213 + Psest_2109 0.49 +0.3 2,239,213 + Psest_2109 0.49 -3.6 2,239,213 + Psest_2109 0.49 +0.1 2,239,214 - Psest_2109 0.49 +2.3 2,239,214 - Psest_2109 0.49 -0.4 2,239,214 - Psest_2109 0.49 +1.3 2,239,214 - Psest_2109 0.49 -2.8 2,239,361 - Psest_2109 0.70 -0.6 2,239,628 + -0.5 2,239,629 - +0.5 2,239,629 - -1.1 2,239,681 + -0.5 2,239,682 - -0.7 2,239,769 + Psest_2110 0.37 +3.2 2,239,769 + Psest_2110 0.37 -0.4 2,239,769 + Psest_2110 0.37 +1.1 2,239,769 + Psest_2110 0.37 -1.1 2,239,769 + Psest_2110 0.37 -1.3 2,239,769 + Psest_2110 0.37 +2.0 2,239,769 + Psest_2110 0.37 -0.4 2,239,770 - Psest_2110 0.37 +1.4 2,239,770 - Psest_2110 0.37 -1.7 2,239,770 - Psest_2110 0.37 -0.2 2,239,928 + -1.0 2,239,929 - -0.3 2,240,022 - +0.2 2,240,022 - -0.4 2,240,390 + -0.1 2,240,422 - +0.4 2,240,422 - -1.1 2,240,422 - +0.7 2,240,548 + -2.5 2,240,549 - +1.9
Or see this region's nucleotide sequence