Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3982

Experiment: RCH2 grown on a colony of 8R2A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 grown on a colony of 8R2A
4,148,462	+		Psest_3980	0.71	+0.1
4,148,558	+				-2.2
4,148,558	+				-2.0
4,148,558	+				-3.8
4,148,558	+				+1.6
4,148,558	+				-2.3
4,148,586	-				+0.2
4,148,586	-				+0.0
4,148,591	+				-2.2
4,148,600	+				+1.7
4,148,600	+				-0.3
4,148,600	+				-1.7
4,148,600	+				-1.9
4,148,601	-				+1.5
4,148,601	-				-2.0
4,148,601	-				-1.4
4,148,601	-				-2.0
4,148,601	-				+0.9
4,148,609	+				-1.7
4,148,609	+				-2.7
4,148,609	+				-0.4
4,148,609	+				+0.4
4,148,609	+				-0.8
4,148,609	+				+0.6
4,148,609	+				+0.6
4,148,610	-				-3.2
4,148,610	-				+3.7
4,148,610	-				-2.5
4,148,610	-				+0.1
4,148,610	-				+1.4
4,148,610	-				+3.1
4,148,610	-				+0.3
4,148,610	-				-1.5
4,148,610	-				+0.2
4,148,613	+				+0.6
4,148,613	+				-0.2
4,148,613	+				-2.0
4,148,613	+				-1.8
4,148,614	-				-0.8
4,148,614	-				+0.9
4,148,614	-				+0.8
4,148,614	-				+0.7
4,148,614	-				-0.4
4,148,614	-				+3.7
4,148,614	-				-0.5
4,148,614	-				+1.6
4,148,614	-				+1.2
4,148,614	-				-3.0
4,148,614	-				+0.2
4,148,614	-				+0.7
4,148,614	-				-0.1
4,148,616	+				+1.1
4,148,616	+				-3.4
4,148,616	+				-1.7
4,148,616	+				-0.3
4,148,616	+				-3.2
4,148,617	-				-1.2
4,148,617	-				+0.1
4,148,617	-				+0.3
4,148,708	+				-1.7
4,148,708	+				-2.4
4,148,709	-				+1.2
4,148,709	-				-2.5
4,148,709	-				-0.9
4,148,760	-				-1.8
4,148,760	-				+2.1
4,148,760	-				+1.7
4,148,804	+		Psest_3981	0.15	-1.4
4,148,804	+		Psest_3981	0.15	+1.3
4,148,804	+		Psest_3981	0.15	+0.5
4,148,805	-		Psest_3981	0.15	+0.2
4,148,957	+		Psest_3981	0.42	-1.6
4,148,958	-		Psest_3981	0.42	-0.2
4,148,990	+		Psest_3981	0.47	-0.6
4,149,008	+		Psest_3981	0.50	+0.2
4,149,008	+		Psest_3981	0.50	-1.4
4,149,008	+		Psest_3981	0.50	-0.7
4,149,008	+		Psest_3981	0.50	-2.9
4,149,008	+		Psest_3981	0.50	-0.7
4,149,008	+		Psest_3981	0.50	-3.0
4,149,009	-		Psest_3981	0.51	+1.3
4,149,009	-		Psest_3981	0.51	-0.5
4,149,009	-		Psest_3981	0.51	-4.0
4,149,015	+		Psest_3981	0.52	+2.4
4,149,015	+		Psest_3981	0.52	+0.2
4,149,015	+		Psest_3981	0.52	-2.9
4,149,016	-		Psest_3981	0.52	-3.4
4,149,016	-		Psest_3981	0.52	+2.8
4,149,016	-		Psest_3981	0.52	-2.8
4,149,017	+		Psest_3981	0.52	-1.7
4,149,017	+		Psest_3981	0.52	-0.3
4,149,017	+		Psest_3981	0.52	+1.0
4,149,017	+		Psest_3981	0.52	+0.2
4,149,017	+		Psest_3981	0.52	+0.6
4,149,017	+		Psest_3981	0.52	+0.9
4,149,017	+		Psest_3981	0.52	+0.9
4,149,017	+		Psest_3981	0.52	+1.3
4,149,017	+		Psest_3981	0.52	-2.0
4,149,017	+		Psest_3981	0.52	-1.8
4,149,017	+		Psest_3981	0.52	+0.6
4,149,017	+		Psest_3981	0.52	-0.3
4,149,017	+		Psest_3981	0.52	+2.6
4,149,017	+		Psest_3981	0.52	-1.1
4,149,017	+		Psest_3981	0.52	-0.1
4,149,017	+		Psest_3981	0.52	-1.5
4,149,017	+		Psest_3981	0.52	-0.7
4,149,017	+		Psest_3981	0.52	-2.1
4,149,017	+		Psest_3981	0.52	-0.9
4,149,017	+		Psest_3981	0.52	+2.4
4,149,017	+		Psest_3981	0.52	+2.7
4,149,018	-		Psest_3981	0.52	-0.7
4,149,018	-		Psest_3981	0.52	+0.7
4,149,018	-		Psest_3981	0.52	-2.5
4,149,018	-		Psest_3981	0.52	-0.3
4,149,018	-		Psest_3981	0.52	-2.4
4,149,018	-		Psest_3981	0.52	-2.2
4,149,018	-		Psest_3981	0.52	+0.4
4,149,018	-		Psest_3981	0.52	+0.5
4,149,018	-		Psest_3981	0.52	+0.3
4,149,018	-		Psest_3981	0.52	-1.2
4,149,018	-		Psest_3981	0.52	-1.6
4,149,018	-		Psest_3981	0.52	-1.5
4,149,018	-		Psest_3981	0.52	-2.3
4,149,018	-		Psest_3981	0.52	+1.5
4,149,018	-		Psest_3981	0.52	+0.7
4,149,018	-		Psest_3981	0.52	+0.2
4,149,018	-		Psest_3981	0.52	+2.2
4,149,018	-		Psest_3981	0.52	-0.5
4,149,018	-		Psest_3981	0.52	-0.1
4,149,018	-		Psest_3981	0.52	-1.2
4,149,018	-		Psest_3981	0.52	-2.1
4,149,018	-		Psest_3981	0.52	+2.0
4,149,018	-		Psest_3981	0.52	-2.6
4,149,018	-		Psest_3981	0.52	+0.6
4,149,042	+		Psest_3981	0.56	-0.4
4,149,050	+		Psest_3981	0.58	-1.8
4,149,050	+		Psest_3981	0.58	-2.4
4,149,050	+		Psest_3981	0.58	+7.3
4,149,050	+		Psest_3981	0.58	+0.2
4,149,050	+		Psest_3981	0.58	-2.2
4,149,050	+		Psest_3981	0.58	+0.1
4,149,050	+		Psest_3981	0.58	-1.7
4,149,050	+		Psest_3981	0.58	+2.9
4,149,050	+		Psest_3981	0.58	+6.7
4,149,050	+		Psest_3981	0.58	-1.3
4,149,050	+		Psest_3981	0.58	-2.4
4,149,050	+		Psest_3981	0.58	+0.6
4,149,050	+		Psest_3981	0.58	-1.7
4,149,050	+		Psest_3981	0.58	-2.0
4,149,050	+		Psest_3981	0.58	-2.6
4,149,051	-		Psest_3981	0.58	-2.7
4,149,051	-		Psest_3981	0.58	+1.3
4,149,051	-		Psest_3981	0.58	+0.5
4,149,051	-		Psest_3981	0.58	-0.1
4,149,051	-		Psest_3981	0.58	-1.5
4,149,051	-		Psest_3981	0.58	+0.7
4,149,051	-		Psest_3981	0.58	-0.3
4,149,051	-		Psest_3981	0.58	+0.9
4,149,051	-		Psest_3981	0.58	+0.0
4,149,051	-		Psest_3981	0.58	-3.3
4,149,051	-		Psest_3981	0.58	+1.6
4,149,051	-		Psest_3981	0.58	-2.7
4,149,051	-		Psest_3981	0.58	+0.6
4,149,051	-		Psest_3981	0.58	+4.3
4,149,057	+		Psest_3981	0.59	-2.5
4,149,057	+		Psest_3981	0.59	-1.6
4,149,057	+		Psest_3981	0.59	+2.6
4,149,057	+		Psest_3981	0.59	-2.6
4,149,057	+		Psest_3981	0.59	+1.9
4,149,057	+		Psest_3981	0.59	-3.3
4,149,058	-		Psest_3981	0.59	-2.2
4,149,058	-		Psest_3981	0.59	-1.1
4,149,058	-		Psest_3981	0.59	-3.0
4,149,058	-		Psest_3981	0.59	-0.6
4,149,061	+		Psest_3981	0.60	-0.3
4,149,062	-		Psest_3981	0.60	+0.2
4,149,137	+		Psest_3981	0.73	-3.1
4,149,137	+		Psest_3981	0.73	-1.8
4,149,137	+		Psest_3981	0.73	-1.5
4,149,138	-		Psest_3981	0.73	+0.1
4,149,309	+				+0.7
4,149,309	+				+0.7
4,149,430	+				+1.3
4,149,431	-				+1.1
4,149,522	-		Psest_3982	0.14	+1.2
4,149,522	-		Psest_3982	0.14	+2.9
4,149,522	-		Psest_3982	0.14	-1.5
4,149,554	+		Psest_3982	0.17	-1.1
4,149,554	+		Psest_3982	0.17	+1.1
4,149,554	+		Psest_3982	0.17	+1.6
4,149,554	+		Psest_3982	0.17	-0.2
4,149,554	+		Psest_3982	0.17	+0.8
4,149,555	-		Psest_3982	0.17	+3.6
4,149,555	-		Psest_3982	0.17	+1.6
4,149,555	-		Psest_3982	0.17	-2.4
4,149,555	-		Psest_3982	0.17	-1.0
4,149,555	-		Psest_3982	0.17	+2.4
4,149,555	-		Psest_3982	0.17	-1.4
4,149,555	-		Psest_3982	0.17	+1.6
4,149,555	-		Psest_3982	0.17	+1.3
4,149,555	-		Psest_3982	0.17	-0.9
4,149,555	-		Psest_3982	0.17	-0.9
4,149,555	-		Psest_3982	0.17	+1.6
4,149,555	-		Psest_3982	0.17	+2.4
4,149,555	-		Psest_3982	0.17	+1.4
4,149,555	-		Psest_3982	0.17	-3.6
4,149,555	-		Psest_3982	0.17	-0.9
4,149,555	-		Psest_3982	0.17	-2.3
4,149,555	-		Psest_3982	0.17	+1.9
4,149,555	-		Psest_3982	0.17	+1.9
4,149,614	+		Psest_3982	0.21	-2.0
4,149,652	+		Psest_3982	0.24	+0.8
4,149,888	+		Psest_3982	0.42	-0.1
4,149,889	-		Psest_3982	0.42	-3.1
4,149,936	-		Psest_3982	0.46	+0.2
4,150,058	+		Psest_3982	0.55	-0.4
4,150,058	+		Psest_3982	0.55	+1.1
4,150,058	+		Psest_3982	0.55	-0.6
4,150,059	-		Psest_3982	0.55	-1.0
4,150,059	-		Psest_3982	0.55	-0.4
4,150,059	-		Psest_3982	0.55	+0.3
4,150,274	+		Psest_3982	0.71	-1.7
4,150,274	+		Psest_3982	0.71	+5.0
4,150,274	+		Psest_3982	0.71	+1.4
4,150,274	+		Psest_3982	0.71	-2.9
4,150,275	-		Psest_3982	0.72	-0.7
4,150,275	-		Psest_3982	0.72	+0.3
4,150,275	-		Psest_3982	0.72	+2.8
4,150,292	+		Psest_3982	0.73	+1.5
4,150,292	+		Psest_3982	0.73	-2.7
4,150,293	-		Psest_3982	0.73	+1.8
4,150,293	-		Psest_3982	0.73	+2.5
4,150,293	-		Psest_3982	0.73	-0.1
4,150,293	-		Psest_3982	0.73	+0.9
4,150,293	-		Psest_3982	0.73	-2.7
4,150,391	+		Psest_3982	0.80	-1.1
4,150,391	+		Psest_3982	0.80	+1.9
4,150,391	+		Psest_3982	0.80	+1.4
4,150,391	+		Psest_3982	0.80	-0.1
4,150,391	+		Psest_3982	0.80	-1.1
4,150,391	+		Psest_3982	0.80	+1.7
4,150,391	+		Psest_3982	0.80	-1.0
4,150,391	+		Psest_3982	0.80	-0.4
4,150,392	-		Psest_3982	0.80	+0.3
4,150,392	-		Psest_3982	0.80	-1.7
4,150,392	-		Psest_3982	0.80	-0.5
4,150,392	-		Psest_3982	0.80	+1.5
4,150,392	-		Psest_3982	0.80	+0.6
4,150,761	+				+2.1
4,150,761	+				-0.4
4,150,761	+				-3.3
4,150,761	+				-0.1
4,150,762	-				-1.1
4,150,762	-				-1.7
4,151,001	+		Psest_3983	0.35	-0.6
4,151,001	+		Psest_3983	0.35	-2.2
4,151,001	+		Psest_3983	0.35	+0.3
4,151,073	+		Psest_3983	0.43	+1.0
4,151,073	+		Psest_3983	0.43	-1.5
4,151,073	+		Psest_3983	0.43	-0.3
4,151,073	+		Psest_3983	0.43	-2.1
4,151,091	+		Psest_3983	0.45	-0.4
4,151,091	+		Psest_3983	0.45	+2.3
4,151,091	+		Psest_3983	0.45	-0.2
4,151,091	+		Psest_3983	0.45	+4.6
4,151,324	-		Psest_3983	0.70	-0.7
4,151,328	+		Psest_3983	0.71	+2.1
4,151,483	-		Psest_3983	0.88	-3.5
4,151,592	+				-0.9
4,151,592	+				-2.8
4,151,592	+				+0.7
4,151,593	-				-1.8
4,151,610	+				-0.9
4,151,611	-				-1.1