Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4130

Experiment: RCH2 grown on a colony of N2C3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 grown on a colony of N2C3
4,308,388	+		Psest_4129	0.63	-0.6
4,308,389	-		Psest_4129	0.63	+1.6
4,308,460	+		Psest_4129	0.67	-1.2
4,308,460	+		Psest_4129	0.67	-1.5
4,308,460	+		Psest_4129	0.67	+0.9
4,308,461	-		Psest_4129	0.67	-0.9
4,308,472	+		Psest_4129	0.68	-1.7
4,308,472	+		Psest_4129	0.68	-1.3
4,308,472	+		Psest_4129	0.68	-0.0
4,308,472	+		Psest_4129	0.68	-1.3
4,308,473	-		Psest_4129	0.68	+1.4
4,308,473	-		Psest_4129	0.68	-2.8
4,308,473	-		Psest_4129	0.68	+0.3
4,308,473	-		Psest_4129	0.68	-1.2
4,308,473	-		Psest_4129	0.68	-2.4
4,308,631	+		Psest_4129	0.79	-0.7
4,308,683	-		Psest_4129	0.82	+0.7
4,308,806	-				-1.9
4,308,806	-				-1.6
4,308,806	-				+0.1
4,308,950	+				-1.8
4,308,999	+				+0.2
4,309,000	-				+0.9
4,309,000	-				+0.0
4,309,000	-				-0.2
4,309,126	+				+1.2
4,309,126	+				-0.9
4,309,127	-				-0.6
4,309,204	+				-0.3
4,309,238	+				-0.9
4,309,239	-				-1.1
4,309,370	+		Psest_4130	0.11	-2.4
4,309,370	+		Psest_4130	0.11	+1.3
4,309,370	+		Psest_4130	0.11	+0.7
4,309,370	+		Psest_4130	0.11	+0.6
4,309,371	-		Psest_4130	0.11	+0.8
4,309,469	+		Psest_4130	0.19	-2.8
4,309,469	+		Psest_4130	0.19	-0.1
4,309,469	+		Psest_4130	0.19	+0.6
4,309,469	+		Psest_4130	0.19	-0.2
4,309,469	+		Psest_4130	0.19	-0.7
4,309,469	+		Psest_4130	0.19	+1.4
4,309,469	+		Psest_4130	0.19	+0.0
4,309,470	-		Psest_4130	0.19	+0.6
4,309,470	-		Psest_4130	0.19	-0.1
4,309,470	-		Psest_4130	0.19	+1.6
4,309,470	-		Psest_4130	0.19	-2.0
4,309,470	-		Psest_4130	0.19	-3.3
4,309,470	-		Psest_4130	0.19	+0.5
4,309,470	-		Psest_4130	0.19	-1.5
4,309,470	-		Psest_4130	0.19	-0.6
4,309,470	-		Psest_4130	0.19	+1.4
4,309,482	+		Psest_4130	0.20	+0.9
4,309,483	-		Psest_4130	0.20	-0.4
4,309,574	+		Psest_4130	0.28	-2.2
4,309,574	+		Psest_4130	0.28	-1.6
4,309,574	+		Psest_4130	0.28	-1.8
4,309,575	-		Psest_4130	0.28	+2.3
4,309,575	-		Psest_4130	0.28	-1.0
4,309,601	+		Psest_4130	0.30	+2.0
4,309,601	+		Psest_4130	0.30	+0.2
4,309,601	+		Psest_4130	0.30	+3.0
4,309,601	+		Psest_4130	0.30	+0.9
4,309,601	+		Psest_4130	0.30	-1.7
4,309,602	-		Psest_4130	0.30	-2.2
4,309,602	-		Psest_4130	0.30	+0.4
4,309,602	-		Psest_4130	0.30	-0.6
4,309,602	-		Psest_4130	0.30	+1.7
4,309,602	-		Psest_4130	0.30	+0.0
4,309,602	-		Psest_4130	0.30	-0.3
4,309,790	+		Psest_4130	0.46	-1.6
4,309,790	+		Psest_4130	0.46	+0.4
4,309,790	+		Psest_4130	0.46	-0.2
4,309,790	+		Psest_4130	0.46	+0.4
4,309,790	+		Psest_4130	0.46	-1.8
4,309,790	+		Psest_4130	0.46	-0.9
4,309,790	+		Psest_4130	0.46	-0.3
4,309,790	+		Psest_4130	0.46	+0.5
4,309,790	+		Psest_4130	0.46	-0.4
4,309,790	+		Psest_4130	0.46	+1.4
4,309,790	+		Psest_4130	0.46	+0.0
4,309,790	+		Psest_4130	0.46	+0.3
4,309,790	+		Psest_4130	0.46	+2.0
4,309,790	+		Psest_4130	0.46	-1.0
4,309,790	+		Psest_4130	0.46	-0.0
4,309,790	+		Psest_4130	0.46	-0.7
4,309,790	+		Psest_4130	0.46	-0.8
4,309,790	+		Psest_4130	0.46	-0.4
4,309,790	+		Psest_4130	0.46	-0.1
4,309,790	+		Psest_4130	0.46	-0.5
4,309,790	+		Psest_4130	0.46	+1.8
4,309,790	+		Psest_4130	0.46	-1.3
4,309,790	+		Psest_4130	0.46	-0.3
4,309,790	+		Psest_4130	0.46	-2.2
4,309,790	+		Psest_4130	0.46	-2.4
4,309,790	+		Psest_4130	0.46	-0.1
4,309,790	+		Psest_4130	0.46	+0.4
4,309,790	+		Psest_4130	0.46	+0.0
4,309,790	+		Psest_4130	0.46	-0.2
4,309,790	+		Psest_4130	0.46	-2.1
4,309,790	+		Psest_4130	0.46	+1.2
4,309,790	+		Psest_4130	0.46	-1.5
4,309,790	+		Psest_4130	0.46	+0.0
4,309,790	+		Psest_4130	0.46	-0.7
4,309,791	-		Psest_4130	0.46	-0.7
4,309,791	-		Psest_4130	0.46	+1.6
4,309,791	-		Psest_4130	0.46	+0.0
4,309,791	-		Psest_4130	0.46	-1.1
4,309,791	-		Psest_4130	0.46	+2.2
4,309,791	-		Psest_4130	0.46	+1.6
4,309,791	-		Psest_4130	0.46	-0.9
4,309,791	-		Psest_4130	0.46	+2.8
4,309,791	-		Psest_4130	0.46	-0.2
4,309,791	-		Psest_4130	0.46	+0.6
4,309,791	-		Psest_4130	0.46	-1.6
4,309,791	-		Psest_4130	0.46	+0.6
4,309,791	-		Psest_4130	0.46	+0.3
4,309,791	-		Psest_4130	0.46	-2.2
4,309,791	-		Psest_4130	0.46	-0.2
4,309,791	-		Psest_4130	0.46	+1.0
4,309,791	-		Psest_4130	0.46	-0.7
4,309,791	-		Psest_4130	0.46	-0.7
4,309,791	-		Psest_4130	0.46	+1.6
4,309,791	-		Psest_4130	0.46	-1.2
4,309,791	-		Psest_4130	0.46	+2.2
4,309,791	-		Psest_4130	0.46	+1.2
4,309,791	-		Psest_4130	0.46	-2.0
4,309,961	+		Psest_4130	0.60	+1.0
4,309,961	+		Psest_4130	0.60	-0.9
4,309,961	+		Psest_4130	0.60	-0.4
4,309,961	+		Psest_4130	0.60	+0.8
4,309,961	+		Psest_4130	0.60	-0.7
4,309,961	+		Psest_4130	0.60	+0.1
4,309,961	+		Psest_4130	0.60	+1.7
4,309,961	+		Psest_4130	0.60	-1.4
4,309,961	+		Psest_4130	0.60	+0.4
4,309,961	+		Psest_4130	0.60	+0.0
4,309,962	-		Psest_4130	0.60	+1.9
4,309,962	-		Psest_4130	0.60	-0.7
4,309,962	-		Psest_4130	0.60	-1.3
4,309,962	-		Psest_4130	0.60	+1.0
4,309,962	-		Psest_4130	0.60	+3.0
4,309,962	-		Psest_4130	0.60	-1.9
4,309,962	-		Psest_4130	0.60	+0.2
4,309,962	-		Psest_4130	0.60	-0.4
4,309,962	-		Psest_4130	0.60	+1.7
4,309,962	-		Psest_4130	0.60	-2.5
4,309,962	-		Psest_4130	0.60	-1.9
4,309,962	-		Psest_4130	0.60	+0.5
4,309,962	-		Psest_4130	0.60	-0.5
4,309,962	-		Psest_4130	0.60	+1.1
4,309,962	-		Psest_4130	0.60	-2.5
4,309,962	-		Psest_4130	0.60	+0.6
4,309,962	-		Psest_4130	0.60	-0.9
4,309,962	-		Psest_4130	0.60	-1.5
4,309,962	-		Psest_4130	0.60	+1.0
4,309,962	-		Psest_4130	0.60	+0.2
4,309,962	-		Psest_4130	0.60	+0.7
4,309,962	-		Psest_4130	0.60	-0.7
4,309,962	-		Psest_4130	0.60	+0.6
4,309,962	-		Psest_4130	0.60	-1.0
4,309,962	-		Psest_4130	0.60	+0.3
4,309,962	-		Psest_4130	0.60	-1.0
4,309,962	-		Psest_4130	0.60	-0.7
4,309,967	+		Psest_4130	0.60	+1.0
4,309,967	+		Psest_4130	0.60	+0.7
4,309,967	+		Psest_4130	0.60	-1.6
4,309,967	+		Psest_4130	0.60	-0.8
4,309,967	+		Psest_4130	0.60	+0.7
4,309,968	-		Psest_4130	0.60	+2.4
4,309,968	-		Psest_4130	0.60	+0.5
4,309,968	-		Psest_4130	0.60	+0.3
4,309,968	-		Psest_4130	0.60	-0.6
4,309,968	-		Psest_4130	0.60	-2.5
4,310,307	+		Psest_4130	0.88	-0.9
4,310,307	+		Psest_4130	0.88	+0.0
4,310,404	+				+0.6
4,310,404	+				+0.3
4,310,404	+				-1.2
4,310,405	-				-0.4
4,310,405	-				+0.8
4,310,405	-				-1.4
4,310,408	+				-1.0
4,310,408	+				+0.8
4,310,408	+				-1.0
4,310,409	-				-0.2
4,310,409	-				-0.4
4,310,409	-				+1.1
4,310,409	-				+1.0
4,310,409	-				-0.6
4,310,409	-				+0.8
4,310,409	-				-0.1
4,310,409	-				-0.4
4,310,409	-				-2.7
4,310,409	-				-1.9
4,310,409	-				-2.7
4,310,409	-				-1.7
4,310,409	-				-0.4
4,310,409	-				+1.2
4,310,409	-				-2.8
4,310,409	-				-0.7
4,310,445	+				+1.1
4,310,445	+				+1.7
4,310,446	-				+0.0
4,310,530	+				-0.2
4,310,530	+				-2.2
4,310,530	+				+0.0
4,310,530	+				+0.1
4,310,530	+				-1.0
4,310,530	+				+1.6
4,310,530	+				+0.0
4,310,530	+				+4.2
4,310,530	+				-1.6
4,310,530	+				+0.4
4,310,530	+				-1.2
4,310,530	+				-0.4
4,310,530	+				-0.5
4,310,530	+				+0.3
4,310,530	+				+0.3
4,310,530	+				-0.9
4,310,530	+				-1.8
4,310,530	+				+2.0
4,310,530	+				-0.4
4,310,531	-				+2.5
4,310,531	-				+3.6
4,310,531	-				+3.1
4,310,531	-				+1.6
4,310,531	-				-0.5
4,310,531	-				-0.7
4,310,531	-				+0.4
4,310,531	-				-0.7
4,310,531	-				+1.5
4,310,531	-				+2.8
4,310,531	-				+3.5
4,310,531	-				-1.2
4,310,531	-				+0.0
4,310,531	-				+0.3
4,310,531	-				-1.3
4,310,531	-				-0.2
4,310,531	-				-0.9
4,310,531	-				-4.1
4,310,531	-				-1.9
4,310,531	-				-0.7
4,310,625	+				-1.1
4,310,625	+				+2.7
4,310,625	+				+0.8
4,310,626	-				+3.2
4,310,626	-				-1.9
4,310,686	-				+3.0
4,310,807	+				+0.3
4,310,978	+		Psest_4131	0.18	-2.8
4,310,979	-		Psest_4131	0.18	-0.9
4,310,979	-		Psest_4131	0.18	-0.4
4,311,053	+		Psest_4131	0.22	+1.5
4,311,053	+		Psest_4131	0.22	+1.4
4,311,053	+		Psest_4131	0.22	-1.9
4,311,053	+		Psest_4131	0.22	+0.8
4,311,053	+		Psest_4131	0.22	-1.9
4,311,054	-		Psest_4131	0.23	+1.5
4,311,054	-		Psest_4131	0.23	-1.0
4,311,054	-		Psest_4131	0.23	-0.3
4,311,068	+		Psest_4131	0.23	+1.3