Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3423

Experiment: RCH2 grown on a colony of N2C3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 grown on a colony of N2C3
3,590,236	+				-2.8
3,590,245	+				-1.8
3,590,245	+				-1.1
3,590,246	-				-0.1
3,590,246	-				+0.2
3,590,311	-				+1.8
3,590,311	-				-0.3
3,590,347	+				-0.8
3,590,392	+				+0.9
3,590,392	+				+0.7
3,590,392	+				-1.7
3,590,392	+				+1.3
3,590,392	+				-0.6
3,590,392	+				+4.0
3,590,392	+				-1.7
3,590,393	-				+0.9
3,590,393	-				+1.5
3,590,393	-				+2.0
3,590,416	+				+0.2
3,590,417	-				+0.4
3,590,475	-		Psest_3421	0.40	-0.7
3,590,482	+		Psest_3421	0.44	-2.6
3,590,482	+		Psest_3421	0.44	+1.6
3,590,483	-		Psest_3421	0.44	+0.3
3,590,483	-		Psest_3421	0.44	+2.2
3,590,483	-		Psest_3421	0.44	-2.1
3,590,509	+		Psest_3421	0.59	-0.1
3,590,510	-		Psest_3421	0.60	+0.5
3,590,669	+				+1.5
3,590,669	+				-0.6
3,590,669	+				+0.0
3,590,670	-				-0.5
3,590,689	+				+2.7
3,590,690	-				+0.5
3,590,690	-				+0.9
3,590,690	-				+1.4
3,590,693	+				-0.9
3,590,693	+				-1.5
3,590,694	-				+1.5
3,590,694	-				-2.3
3,590,706	-				-1.1
3,590,769	+				+2.8
3,590,769	+				-1.9
3,590,769	+				-0.0
3,590,770	-				-0.2
3,590,770	-				-0.6
3,590,865	-		Psest_3422	0.39	-0.5
3,590,905	-		Psest_3422	0.52	-0.0
3,590,922	-		Psest_3422	0.58	+2.4
3,590,922	-		Psest_3422	0.58	-0.6
3,590,922	-		Psest_3422	0.58	+0.2
3,590,922	-		Psest_3422	0.58	+0.9
3,590,946	-		Psest_3422	0.66	-2.4
3,591,007	-		Psest_3422	0.85	+2.0
3,591,049	+				-1.5
3,591,049	+				-2.1
3,591,049	+				+1.2
3,591,049	+				-2.4
3,591,049	+				+0.5
3,591,049	+				+0.5
3,591,076	+				-1.7
3,591,094	+				-1.8
3,591,094	+				+2.1
3,591,094	+				-0.7
3,591,094	+				-1.2
3,591,105	+				-0.9
3,591,105	+				-1.9
3,591,106	-				-0.2
3,591,106	-				-1.6
3,591,109	+				+0.6
3,591,109	+				+0.7
3,591,109	+				+0.8
3,591,109	+				+1.4
3,591,110	-				+2.2
3,591,110	-				-1.7
3,591,110	-				-0.3
3,591,110	-				+1.2
3,591,110	-				-0.6
3,591,111	+				+3.3
3,591,111	+				+1.4
3,591,111	+				+0.3
3,591,111	+				+0.4
3,591,111	+				+0.6
3,591,111	+				+1.9
3,591,112	-				+0.6
3,591,112	-				+0.2
3,591,112	-				+1.3
3,591,160	+				-0.7
3,591,162	+				-1.6
3,591,162	+				-0.3
3,591,162	+				-2.2
3,591,162	+				-0.7
3,591,162	+				+2.0
3,591,162	+				+2.2
3,591,162	+				+1.2
3,591,162	+				-2.5
3,591,162	+				-0.6
3,591,162	+				-0.1
3,591,162	+				-1.1
3,591,162	+				+1.6
3,591,162	+				+0.9
3,591,162	+				-1.6
3,591,162	+				+0.6
3,591,162	+				-0.3
3,591,162	+				+2.9
3,591,162	+				-2.5
3,591,162	+				-1.7
3,591,162	+				-0.5
3,591,162	+				-1.3
3,591,162	+				-0.1
3,591,162	+				-0.1
3,591,162	+				-1.3
3,591,162	+				-1.4
3,591,162	+				-0.4
3,591,162	+				+0.3
3,591,162	+				-1.7
3,591,162	+				-1.6
3,591,162	+				+2.5
3,591,163	-				-2.8
3,591,163	-				+1.3
3,591,163	-				+1.7
3,591,163	-				-0.5
3,591,163	-				+0.5
3,591,163	-				+2.5
3,591,163	-				-1.2
3,591,163	-				-0.3
3,591,163	-				-1.2
3,591,163	-				-1.3
3,591,163	-				-0.1
3,591,163	-				-2.8
3,591,163	-				+4.0
3,591,163	-				+1.1
3,591,163	-				-0.9
3,591,163	-				+0.9
3,591,163	-				+0.0
3,591,163	-				+0.7
3,591,163	-				-1.0
3,591,163	-				-1.2
3,591,163	-				-1.5
3,591,163	-				-1.9
3,591,163	-				-0.4
3,591,163	-				+0.1
3,591,163	-				-0.6
3,591,163	-				-1.6
3,591,163	-				+1.5
3,591,163	-				-0.1
3,591,163	-				-1.5
3,591,163	-				+4.0
3,591,163	-				-2.9
3,591,163	-				+0.4
3,591,163	-				+1.2
3,591,163	-				+0.9
3,591,163	-				-1.7
3,591,163	-				-0.2
3,591,163	-				+0.6
3,591,163	-				+2.9
3,591,163	-				-0.8
3,591,163	-				-0.5
3,591,163	-				+0.6
3,591,224	+				+1.0
3,591,250	-		Psest_3423	0.13	-2.1
3,591,297	-		Psest_3423	0.21	+3.7
3,591,315	+		Psest_3423	0.24	-2.1
3,591,315	+		Psest_3423	0.24	+1.2
3,591,315	+		Psest_3423	0.24	-0.3
3,591,338	+		Psest_3423	0.27	-1.8
3,591,338	+		Psest_3423	0.27	-0.7
3,591,338	+		Psest_3423	0.27	-0.9
3,591,338	+		Psest_3423	0.27	+0.6
3,591,338	+		Psest_3423	0.27	+0.0
3,591,338	+		Psest_3423	0.27	-1.0
3,591,338	+		Psest_3423	0.27	+1.8
3,591,338	+		Psest_3423	0.27	+2.4
3,591,338	+		Psest_3423	0.27	-0.9
3,591,338	+		Psest_3423	0.27	-1.2
3,591,338	+		Psest_3423	0.27	+0.0
3,591,338	+		Psest_3423	0.27	-0.3
3,591,338	+		Psest_3423	0.27	-2.1
3,591,338	+		Psest_3423	0.27	-0.9
3,591,338	+		Psest_3423	0.27	-1.2
3,591,339	-		Psest_3423	0.27	-2.0
3,591,339	-		Psest_3423	0.27	+0.9
3,591,339	-		Psest_3423	0.27	+1.3
3,591,339	-		Psest_3423	0.27	+0.2
3,591,339	-		Psest_3423	0.27	-1.2
3,591,339	-		Psest_3423	0.27	+1.3
3,591,339	-		Psest_3423	0.27	-1.1
3,591,339	-		Psest_3423	0.27	-1.2
3,591,339	-		Psest_3423	0.27	-0.5
3,591,339	-		Psest_3423	0.27	+0.5
3,591,339	-		Psest_3423	0.27	-0.1
3,591,339	-		Psest_3423	0.27	-2.1
3,591,339	-		Psest_3423	0.27	+1.2
3,591,339	-		Psest_3423	0.27	-1.8
3,591,339	-		Psest_3423	0.27	-1.5
3,591,339	-		Psest_3423	0.27	-1.9
3,591,339	-		Psest_3423	0.27	-1.7
3,591,339	-		Psest_3423	0.27	-1.6
3,591,339	-		Psest_3423	0.27	-3.3
3,591,393	-		Psest_3423	0.36	-1.1
3,591,393	-		Psest_3423	0.36	+1.4
3,591,421	-		Psest_3423	0.41	-0.1
3,591,472	+		Psest_3423	0.49	-2.8
3,591,472	+		Psest_3423	0.49	-1.6
3,591,472	+		Psest_3423	0.49	-2.2
3,591,473	-		Psest_3423	0.49	+0.4
3,591,473	-		Psest_3423	0.49	-2.6
3,591,608	-		Psest_3423	0.71	+0.7
3,591,640	+		Psest_3423	0.76	+0.1
3,591,655	+		Psest_3423	0.78	-0.5
3,591,656	-		Psest_3423	0.78	-0.3
3,591,656	-		Psest_3423	0.78	-0.3
3,591,705	+		Psest_3423	0.86	+1.4
3,591,705	+		Psest_3423	0.86	-1.3
3,591,705	+		Psest_3423	0.86	-2.3
3,591,705	+		Psest_3423	0.86	-1.1
3,591,706	-		Psest_3423	0.86	+0.8
3,591,706	-		Psest_3423	0.86	-1.3
3,591,706	-		Psest_3423	0.86	-0.3
3,591,706	-		Psest_3423	0.86	-1.4
3,591,706	-		Psest_3423	0.86	-1.6
3,591,739	+				-1.5
3,591,770	+				-2.8
3,591,770	+				-0.6
3,591,774	+				+1.5
3,591,774	+				+1.5
3,591,775	-				+2.7
3,591,866	-				-1.8
3,591,953	+				+0.5
3,591,954	-				-2.3
3,591,954	-				+1.2
3,592,012	-				-0.2
3,592,038	+				+0.5
3,592,050	+				+1.9
3,592,052	+				-1.5
3,592,085	-				-0.6
3,592,121	-				+2.6
3,592,140	+				-0.3
3,592,143	+				+0.3
3,592,144	-				+1.5
3,592,160	+				+1.2
3,592,226	+				-1.5
3,592,227	-				+1.7
3,592,227	-				-0.2
3,592,273	+				-1.9
3,592,292	+				-0.6
3,592,293	-				+2.6
3,592,295	+				-1.3
3,592,295	+				-2.0
3,592,295	+				+3.8
3,592,296	-				-0.2
3,592,296	-				+0.9
3,592,296	-				-0.1
3,592,296	-				-0.6
3,592,296	-				-1.9
3,592,339	-				+1.0
3,592,393	+				-1.6
3,592,451	+		Psest_3424	0.17	-0.9
3,592,470	+		Psest_3424	0.21	-0.5
3,592,470	+		Psest_3424	0.21	-1.6
3,592,494	+		Psest_3424	0.26	-0.4
3,592,495	-		Psest_3424	0.26	+0.4
3,592,497	+		Psest_3424	0.26	-1.5
3,592,497	+		Psest_3424	0.26	+1.5
3,592,498	-		Psest_3424	0.27	-0.3
3,592,498	-		Psest_3424	0.27	-2.4
3,592,506	+		Psest_3424	0.28	+0.5
3,592,506	+		Psest_3424	0.28	+0.7
3,592,506	+		Psest_3424	0.28	-0.7
3,592,506	+		Psest_3424	0.28	-0.6
3,592,506	+		Psest_3424	0.28	-0.8
3,592,507	-		Psest_3424	0.29	-1.5
3,592,582	+		Psest_3424	0.44	+0.3
3,592,583	-		Psest_3424	0.44	-0.3
3,592,696	-		Psest_3424	0.68	-0.2
3,592,702	-		Psest_3424	0.69	-1.6
3,592,774	+		Psest_3424	0.84	+0.2
3,592,779	+		Psest_3424	0.85	+1.4
3,592,782	-		Psest_3424	0.86	+0.5