Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3405

Experiment: RCH2 grown on a colony of N2F3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 grown on a colony of N2F3
3,572,486	-				-0.2
3,572,505	-				-4.8
3,572,528	-				-2.2
3,572,634	+				-0.1
3,572,634	+				+3.2
3,572,634	+				+1.0
3,572,634	+				-1.9
3,572,634	+				+0.2
3,572,635	-				-2.5
3,572,635	-				-1.0
3,572,635	-				-1.3
3,572,635	-				-0.4
3,572,635	-				-3.2
3,572,635	-				-0.3
3,572,658	+				+1.2
3,572,658	+				+0.2
3,572,658	+				-0.9
3,572,658	+				+0.6
3,572,659	-				+0.2
3,572,659	-				-2.6
3,572,659	-				-0.6
3,572,728	+				-0.2
3,572,751	+				-2.1
3,572,751	+				-3.2
3,572,845	-				-0.3
3,572,929	-				-1.7
3,572,929	-				-1.3
3,572,929	-				-2.3
3,572,975	+				-1.1
3,572,975	+				+1.2
3,572,975	+				+2.3
3,572,992	+				+2.1
3,572,992	+				+2.1
3,572,992	+				+0.5
3,572,992	+				+0.8
3,572,992	+				-3.2
3,572,992	+				+0.3
3,572,992	+				-2.7
3,572,993	-				-2.6
3,573,008	+				-0.9
3,573,008	+				-0.4
3,573,008	+				+0.2
3,573,008	+				+0.1
3,573,008	+				+1.6
3,573,008	+				+0.5
3,573,009	-				-1.5
3,573,009	-				-2.7
3,573,009	-				-0.7
3,573,009	-				-2.1
3,573,009	-				-2.9
3,573,009	-				-3.4
3,573,009	-				+1.0
3,573,009	-				-1.1
3,573,031	+				-4.1
3,573,102	+				+2.5
3,573,102	+				-1.6
3,573,117	+				+0.7
3,573,118	-				-0.4
3,573,427	+		Psest_3405	0.15	+0.4
3,573,427	+		Psest_3405	0.15	+1.9
3,573,427	+		Psest_3405	0.15	+1.3
3,573,427	+		Psest_3405	0.15	+0.4
3,573,427	+		Psest_3405	0.15	+0.3
3,573,427	+		Psest_3405	0.15	-0.8
3,573,427	+		Psest_3405	0.15	-2.0
3,573,428	-		Psest_3405	0.16	-1.7
3,573,428	-		Psest_3405	0.16	-1.5
3,573,428	-		Psest_3405	0.16	-2.0
3,573,428	-		Psest_3405	0.16	-2.2
3,573,428	-		Psest_3405	0.16	-0.4
3,573,428	-		Psest_3405	0.16	-1.3
3,573,428	-		Psest_3405	0.16	-3.5
3,573,428	-		Psest_3405	0.16	-2.4
3,573,428	-		Psest_3405	0.16	+0.5
3,573,428	-		Psest_3405	0.16	+1.4
3,573,428	-		Psest_3405	0.16	-1.0
3,573,428	-		Psest_3405	0.16	+1.4
3,573,428	-		Psest_3405	0.16	-1.3
3,573,428	-		Psest_3405	0.16	-0.4
3,573,428	-		Psest_3405	0.16	-2.0
3,573,428	-		Psest_3405	0.16	+0.6
3,573,428	-		Psest_3405	0.16	+0.5
3,573,428	-		Psest_3405	0.16	+0.4
3,573,428	-		Psest_3405	0.16	+2.3
3,573,428	-		Psest_3405	0.16	-1.0
3,573,428	-		Psest_3405	0.16	-3.0
3,573,428	-		Psest_3405	0.16	+0.2
3,573,428	-		Psest_3405	0.16	-0.4
3,573,428	-		Psest_3405	0.16	-0.9
3,573,520	+		Psest_3405	0.20	-1.6
3,573,520	+		Psest_3405	0.20	+0.7
3,573,528	-		Psest_3405	0.21	-1.5
3,573,742	+		Psest_3405	0.31	+0.7
3,573,742	+		Psest_3405	0.31	+0.1
3,573,742	+		Psest_3405	0.31	+0.8
3,573,742	+		Psest_3405	0.31	-0.6
3,573,742	+		Psest_3405	0.31	-0.1
3,573,742	+		Psest_3405	0.31	+0.4
3,573,742	+		Psest_3405	0.31	-0.9
3,573,742	+		Psest_3405	0.31	+0.2
3,573,742	+		Psest_3405	0.31	+2.8
3,573,742	+		Psest_3405	0.31	+5.1
3,573,742	+		Psest_3405	0.31	-1.8
3,573,742	+		Psest_3405	0.31	+0.6
3,573,742	+		Psest_3405	0.31	+2.9
3,573,742	+		Psest_3405	0.31	-2.5
3,573,742	+		Psest_3405	0.31	-2.0
3,573,742	+		Psest_3405	0.31	-0.4
3,573,743	-		Psest_3405	0.31	-1.1
3,573,743	-		Psest_3405	0.31	-1.3
3,573,743	-		Psest_3405	0.31	+0.3
3,573,790	+		Psest_3405	0.34	+1.0
3,573,790	+		Psest_3405	0.34	+0.8
3,573,790	+		Psest_3405	0.34	-0.9
3,573,790	+		Psest_3405	0.34	-0.1
3,573,790	+		Psest_3405	0.34	+0.5
3,573,790	+		Psest_3405	0.34	+0.4
3,573,790	+		Psest_3405	0.34	+1.6
3,573,790	+		Psest_3405	0.34	+1.7
3,573,790	+		Psest_3405	0.34	-3.6
3,573,790	+		Psest_3405	0.34	+2.7
3,573,790	+		Psest_3405	0.34	-0.3
3,573,791	-		Psest_3405	0.34	-1.7
3,573,791	-		Psest_3405	0.34	+0.5
3,573,791	-		Psest_3405	0.34	+1.3
3,573,791	-		Psest_3405	0.34	-3.1
3,573,791	-		Psest_3405	0.34	-1.7
3,573,791	-		Psest_3405	0.34	-2.2
3,573,791	-		Psest_3405	0.34	+0.1
3,573,791	-		Psest_3405	0.34	-1.8
3,573,791	-		Psest_3405	0.34	-0.1
3,573,791	-		Psest_3405	0.34	+0.3
3,573,791	-		Psest_3405	0.34	-0.1
3,573,963	+		Psest_3405	0.43	-0.4
3,573,964	-		Psest_3405	0.43	+0.5
3,574,253	+		Psest_3405	0.57	+0.5
3,574,279	+		Psest_3405	0.59	-2.3
3,574,279	+		Psest_3405	0.59	+0.3
3,574,279	+		Psest_3405	0.59	+0.1
3,574,279	+		Psest_3405	0.59	-0.4
3,574,279	+		Psest_3405	0.59	+2.4
3,574,279	+		Psest_3405	0.59	-1.4
3,574,279	+		Psest_3405	0.59	-1.4
3,574,279	+		Psest_3405	0.59	+0.7
3,574,279	+		Psest_3405	0.59	-1.0
3,574,279	+		Psest_3405	0.59	+0.7
3,574,279	+		Psest_3405	0.59	+1.6
3,574,279	+		Psest_3405	0.59	-0.4
3,574,280	-		Psest_3405	0.59	+1.2
3,574,280	-		Psest_3405	0.59	-2.3
3,574,280	-		Psest_3405	0.59	-0.2
3,574,280	-		Psest_3405	0.59	+0.9
3,574,280	-		Psest_3405	0.59	-0.1
3,574,280	-		Psest_3405	0.59	-2.4
3,574,280	-		Psest_3405	0.59	-2.9
3,574,280	-		Psest_3405	0.59	-0.6
3,574,280	-		Psest_3405	0.59	+0.3
3,574,280	-		Psest_3405	0.59	+0.6
3,574,280	-		Psest_3405	0.59	+1.9
3,574,280	-		Psest_3405	0.59	-0.0
3,574,280	-		Psest_3405	0.59	+1.0
3,574,280	-		Psest_3405	0.59	+0.2
3,574,280	-		Psest_3405	0.59	-0.1
3,574,280	-		Psest_3405	0.59	-1.6
3,574,280	-		Psest_3405	0.59	-0.4
3,574,280	-		Psest_3405	0.59	+0.1
3,574,281	+		Psest_3405	0.59	-1.4
3,574,282	-		Psest_3405	0.59	-0.5
3,574,282	-		Psest_3405	0.59	-0.3
3,574,300	+		Psest_3405	0.60	-3.9
3,574,300	+		Psest_3405	0.60	-2.0
3,574,300	+		Psest_3405	0.60	+1.3
3,574,300	+		Psest_3405	0.60	+2.0
3,574,300	+		Psest_3405	0.60	-2.1
3,574,300	+		Psest_3405	0.60	-1.1
3,574,300	+		Psest_3405	0.60	+1.3
3,574,300	+		Psest_3405	0.60	-0.9
3,574,300	+		Psest_3405	0.60	+4.4
3,574,300	+		Psest_3405	0.60	-1.7
3,574,301	-		Psest_3405	0.60	+0.9
3,574,301	-		Psest_3405	0.60	-1.9
3,574,301	-		Psest_3405	0.60	-1.3
3,574,301	-		Psest_3405	0.60	-2.9
3,574,301	-		Psest_3405	0.60	-2.5
3,574,301	-		Psest_3405	0.60	-1.4
3,574,301	-		Psest_3405	0.60	-1.6
3,574,301	-		Psest_3405	0.60	-2.0
3,574,301	-		Psest_3405	0.60	-1.0
3,574,301	-		Psest_3405	0.60	+0.2
3,574,301	-		Psest_3405	0.60	-0.4
3,574,376	-		Psest_3405	0.63	-0.1
3,574,390	-		Psest_3405	0.64	-1.7
3,574,390	-		Psest_3405	0.64	-2.7
3,574,414	+		Psest_3405	0.65	-0.9
3,574,414	+		Psest_3405	0.65	-0.8
3,574,415	-		Psest_3405	0.65	-1.1
3,574,454	-		Psest_3405	0.67	-0.4
3,574,454	-		Psest_3405	0.67	+2.1
3,574,454	-		Psest_3405	0.67	-3.0
3,574,698	-		Psest_3405	0.80	-1.4
3,574,698	-		Psest_3405	0.80	-0.7
3,574,698	-		Psest_3405	0.80	-3.1
3,574,701	-		Psest_3405	0.80	-0.7
3,574,748	+		Psest_3405	0.82	-0.9
3,574,748	+		Psest_3405	0.82	+1.9
3,574,749	-		Psest_3405	0.82	-2.1
3,574,749	-		Psest_3405	0.82	-2.3
3,574,749	-		Psest_3405	0.82	-0.9
3,574,749	-		Psest_3405	0.82	+1.2
3,574,873	+		Psest_3405	0.89	+0.1
3,574,873	+		Psest_3405	0.89	+0.3
3,574,873	+		Psest_3405	0.89	+3.5
3,574,873	+		Psest_3405	0.89	+0.1
3,574,873	+		Psest_3405	0.89	+1.7
3,574,874	-		Psest_3405	0.89	+0.2
3,574,874	-		Psest_3405	0.89	-2.4
3,574,874	-		Psest_3405	0.89	-2.0
3,574,879	+		Psest_3405	0.89	-2.6
3,574,879	+		Psest_3405	0.89	-1.7
3,574,880	-		Psest_3405	0.89	-3.7
3,574,880	-		Psest_3405	0.89	+0.7
3,574,880	-		Psest_3405	0.89	-2.4
3,574,880	-		Psest_3405	0.89	+0.5
3,574,999	+				-1.4
3,574,999	+				+3.0
3,574,999	+				+0.5
3,574,999	+				+0.6
3,574,999	+				+2.1
3,574,999	+				+0.5
3,574,999	+				-3.4
3,574,999	+				-0.0
3,575,000	-				+0.7
3,575,000	-				+1.6
3,575,000	-				+0.2
3,575,000	-				-1.3
3,575,000	-				-2.1
3,575,000	-				+0.2
3,575,000	-				-0.3
3,575,000	-				-3.0
3,575,000	-				-1.6
3,575,000	-				-2.7
3,575,000	-				+1.2
3,575,000	-				-0.5
3,575,000	-				-1.8
3,575,000	-				-3.7
3,575,000	-				-2.1
3,575,000	-				-2.4
3,575,127	+				+2.0
3,575,127	+				+2.3
3,575,127	+				-0.4
3,575,128	-				-0.7
3,575,158	+				-1.6
3,575,158	+				-0.4
3,575,158	+				-1.9
3,575,158	+				-0.7
3,575,158	+				+0.0
3,575,159	-				-0.1
3,575,159	-				+0.8
3,575,159	-				+0.9
3,575,159	-				-3.2
3,575,159	-				+2.6
3,575,159	-				-1.0
3,575,159	-				-0.2
3,575,159	-				-1.3
3,575,159	-				+0.1
3,575,162	+				+2.5
3,575,171	+				-0.3
3,575,199	-				+0.3
3,575,199	-				-1.4
3,575,237	-				+0.7
3,575,237	-				+0.9
3,575,248	+				+0.4
3,575,249	-				-4.2
3,575,275	-				-0.6
3,575,421	+		Psest_3406	0.15	+0.2
3,575,421	+		Psest_3406	0.15	+0.3
3,575,421	+		Psest_3406	0.15	-2.9
3,575,446	-		Psest_3406	0.17	-1.0
3,575,460	+		Psest_3406	0.18	-0.4
3,575,460	+		Psest_3406	0.18	+0.4
3,575,461	-		Psest_3406	0.18	-2.1
3,575,461	-		Psest_3406	0.18	+0.3
3,575,465	-		Psest_3406	0.18	-0.4
3,575,525	+		Psest_3406	0.23	+1.3
3,575,525	+		Psest_3406	0.23	+0.2
3,575,525	+		Psest_3406	0.23	+1.3
3,575,525	+		Psest_3406	0.23	+0.5
3,575,564	+		Psest_3406	0.26	+0.5
3,575,564	+		Psest_3406	0.26	-0.8
3,575,568	-		Psest_3406	0.26	-0.3
3,575,568	-		Psest_3406	0.26	+2.2
3,575,594	+		Psest_3406	0.28	+2.5
3,575,595	-		Psest_3406	0.28	-0.4
3,575,595	-		Psest_3406	0.28	-2.8
3,575,644	+		Psest_3406	0.32	+0.4
3,575,645	-		Psest_3406	0.32	+0.5
3,575,645	-		Psest_3406	0.32	+1.3
3,575,651	+		Psest_3406	0.32	-2.0
3,575,651	+		Psest_3406	0.32	+0.8
3,575,682	+		Psest_3406	0.35	+0.4
3,575,985	+		Psest_3406	0.57	+1.3
3,575,986	-		Psest_3406	0.57	+2.0
3,576,031	+		Psest_3406	0.61	-0.4
3,576,031	+		Psest_3406	0.61	-0.1
3,576,031	+		Psest_3406	0.61	+1.9
3,576,032	-		Psest_3406	0.61	-1.5
3,576,035	+		Psest_3406	0.61	+3.9
3,576,035	+		Psest_3406	0.61	-0.2
3,576,036	-		Psest_3406	0.61	-0.4
3,576,036	-		Psest_3406	0.61	-3.4
3,576,039	+		Psest_3406	0.61	+0.7
3,576,040	-		Psest_3406	0.62	+1.7
3,576,040	-		Psest_3406	0.62	-2.0
3,576,040	-		Psest_3406	0.62	+1.1