Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2913

Experiment: RCH2 grown on a colony of N2A2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	RCH2 grown on a colony of N2A2
3,104,003	+				+2.3
3,104,041	-				-0.4
3,104,049	-				-0.3
3,104,052	+				+0.3
3,104,053	-				+1.4
3,104,162	+				-1.5
3,104,163	-				-0.7
3,104,337	-		Psest_2911	0.86	+1.6
3,104,337	-		Psest_2911	0.86	+1.9
3,104,337	-		Psest_2911	0.86	+0.1
3,104,536	+		Psest_2912	0.29	-0.3
3,104,536	+		Psest_2912	0.29	-0.7
3,104,536	+		Psest_2912	0.29	-1.0
3,104,536	+		Psest_2912	0.29	-0.6
3,104,536	+		Psest_2912	0.29	-0.1
3,104,536	+		Psest_2912	0.29	-0.0
3,104,537	-		Psest_2912	0.29	-1.7
3,104,883	+		Psest_2912	0.88	+0.0
3,104,883	+		Psest_2912	0.88	+0.7
3,105,001	+				-0.5
3,105,002	-				+3.2
3,105,049	+				-1.3
3,105,050	-				+0.1
3,105,258	-		Psest_2913	0.31	+2.6
3,105,258	-		Psest_2913	0.31	+0.6
3,105,259	+		Psest_2913	0.31	-0.4
3,105,259	+		Psest_2913	0.31	-0.4
3,105,259	+		Psest_2913	0.31	-0.5
3,105,259	+		Psest_2913	0.31	+0.5
3,105,259	+		Psest_2913	0.31	+1.0
3,105,260	-		Psest_2913	0.31	-0.8
3,105,260	-		Psest_2913	0.31	+0.6
3,105,260	-		Psest_2913	0.31	-0.3
3,105,403	+		Psest_2913	0.48	+2.6
3,105,403	+		Psest_2913	0.48	-1.3
3,105,403	+		Psest_2913	0.48	+1.1
3,105,403	+		Psest_2913	0.48	-0.4
3,105,403	+		Psest_2913	0.48	-0.1
3,105,404	-		Psest_2913	0.48	-0.6
3,105,404	-		Psest_2913	0.48	-0.0
3,105,404	-		Psest_2913	0.48	-0.4
3,105,404	-		Psest_2913	0.48	-1.4
3,105,404	-		Psest_2913	0.48	-0.9
3,105,478	+		Psest_2913	0.57	+0.1
3,105,478	+		Psest_2913	0.57	+0.2
3,105,478	+		Psest_2913	0.57	-2.5
3,105,478	+		Psest_2913	0.57	-0.6
3,105,478	+		Psest_2913	0.57	-1.8
3,105,479	-		Psest_2913	0.57	-0.7
3,105,479	-		Psest_2913	0.57	-1.8
3,105,479	-		Psest_2913	0.57	+0.4
3,105,479	-		Psest_2913	0.57	+0.5
3,105,484	+		Psest_2913	0.58	+2.1
3,105,484	+		Psest_2913	0.58	+2.9
3,105,484	+		Psest_2913	0.58	+2.0
3,105,484	+		Psest_2913	0.58	+0.2
3,105,485	-		Psest_2913	0.58	+2.1
3,105,496	+		Psest_2913	0.59	+2.2
3,105,496	+		Psest_2913	0.59	-0.5
3,105,676	+		Psest_2913	0.81	+1.8
3,105,676	+		Psest_2913	0.81	-0.2
3,105,677	-		Psest_2913	0.81	+1.5
3,105,677	-		Psest_2913	0.81	+2.4
3,105,677	-		Psest_2913	0.81	-0.2
3,105,677	-		Psest_2913	0.81	+1.2
3,105,677	-		Psest_2913	0.81	-1.0
3,105,684	+		Psest_2913	0.82	+0.6
3,105,684	+		Psest_2913	0.82	+2.7
3,105,684	+		Psest_2913	0.82	-1.6
3,105,684	+		Psest_2913	0.82	+0.1
3,105,684	+		Psest_2913	0.82	+0.7
3,105,684	+		Psest_2913	0.82	+1.0
3,105,684	+		Psest_2913	0.82	-1.1
3,105,685	-		Psest_2913	0.82	-0.7
3,105,685	-		Psest_2913	0.82	-1.1
3,105,685	-		Psest_2913	0.82	-1.2
3,105,685	-		Psest_2913	0.82	+1.2
3,105,685	-		Psest_2913	0.82	+1.1
3,105,685	-		Psest_2913	0.82	-0.5
3,105,685	-		Psest_2913	0.82	+1.6
3,105,685	-		Psest_2913	0.82	-0.6
3,105,730	+		Psest_2913	0.87	+0.1
3,105,730	+		Psest_2913	0.87	+4.4
3,105,730	+		Psest_2913	0.87	+1.1
3,105,730	+		Psest_2913	0.87	-1.5
3,105,731	-		Psest_2913	0.87	+1.7
3,105,731	-		Psest_2913	0.87	+0.3
3,105,731	-		Psest_2913	0.87	+1.1
3,105,775	+				+0.0
3,105,775	+				-0.7
3,105,775	+				-1.3
3,105,817	+				-1.5
3,105,852	+				-1.7
3,105,852	+				+1.2
3,105,854	+				-0.1
3,105,854	+				+0.2
3,105,855	-				-0.3
3,105,855	-				+0.5
3,105,855	-				-1.0
3,105,855	-				-1.1
3,105,855	-				+3.3
3,105,895	-				-0.6
3,105,985	-				+0.6
3,105,985	-				-0.5
3,105,985	-				-1.6
3,105,985	-				-2.3
3,106,049	+				-2.1
3,106,049	+				+0.5
3,106,049	+				+0.7
3,106,049	+				+0.9
3,106,050	-				-0.2
3,106,050	-				-2.5
3,106,056	+				+0.2
3,106,056	+				+0.5
3,106,068	+				-0.1
3,106,068	+				+3.6
3,106,068	+				+0.7
3,106,072	-				-0.3
3,106,072	-				+0.1
3,106,072	-				+0.9
3,106,111	+		Psest_2914	0.10	+0.8
3,106,178	+		Psest_2914	0.13	-1.4
3,106,239	+		Psest_2914	0.15	-1.5
3,106,239	+		Psest_2914	0.15	+0.9
3,106,240	-		Psest_2914	0.16	-1.5
3,106,240	-		Psest_2914	0.16	+2.2
3,106,350	-		Psest_2914	0.20	+1.6
3,106,353	+		Psest_2914	0.20	-0.6
3,106,353	+		Psest_2914	0.20	-0.3
3,106,353	+		Psest_2914	0.20	+0.3
3,106,353	+		Psest_2914	0.20	-2.2
3,106,353	+		Psest_2914	0.20	+0.4
3,106,353	+		Psest_2914	0.20	-0.3
3,106,353	+		Psest_2914	0.20	-3.0
3,106,353	+		Psest_2914	0.20	-0.6
3,106,353	+		Psest_2914	0.20	+1.5
3,106,354	-		Psest_2914	0.20	+1.9
3,106,354	-		Psest_2914	0.20	+0.3
3,106,354	-		Psest_2914	0.20	-0.8
3,106,354	-		Psest_2914	0.20	+1.9
3,106,354	-		Psest_2914	0.20	-2.5
3,106,354	-		Psest_2914	0.20	+1.0
3,106,354	-		Psest_2914	0.20	+1.0
3,106,354	-		Psest_2914	0.20	+0.4
3,106,354	-		Psest_2914	0.20	-1.9
3,106,354	-		Psest_2914	0.20	+1.3
3,106,354	-		Psest_2914	0.20	-0.6
3,106,405	-		Psest_2914	0.23	-0.1
3,106,737	+		Psest_2914	0.37	-0.8
3,106,737	+		Psest_2914	0.37	-1.7
3,106,737	+		Psest_2914	0.37	+0.2
3,106,737	+		Psest_2914	0.37	-0.5
3,106,737	+		Psest_2914	0.37	-0.5
3,106,737	+		Psest_2914	0.37	-0.0
3,106,737	+		Psest_2914	0.37	-1.0
3,106,737	+		Psest_2914	0.37	+1.6
3,106,737	+		Psest_2914	0.37	+1.6
3,106,737	+		Psest_2914	0.37	+1.3
3,106,737	+		Psest_2914	0.37	+0.3
3,106,737	+		Psest_2914	0.37	+1.6
3,106,737	+		Psest_2914	0.37	-0.2
3,106,737	+		Psest_2914	0.37	+0.7
3,106,737	+		Psest_2914	0.37	-0.3
3,106,737	+		Psest_2914	0.37	-0.2
3,106,737	+		Psest_2914	0.37	+2.0
3,106,737	+		Psest_2914	0.37	-1.9
3,106,737	+		Psest_2914	0.37	+0.4
3,106,737	+		Psest_2914	0.37	+1.1
3,106,737	+		Psest_2914	0.37	-1.1
3,106,737	+		Psest_2914	0.37	+0.3
3,106,737	+		Psest_2914	0.37	-1.5
3,106,737	+		Psest_2914	0.37	+0.4
3,106,737	+		Psest_2914	0.37	-1.2
3,106,737	+		Psest_2914	0.37	+0.8
3,106,737	+		Psest_2914	0.37	-0.2
3,106,737	+		Psest_2914	0.37	+3.2
3,106,737	+		Psest_2914	0.37	-1.1
3,106,737	+		Psest_2914	0.37	+0.1
3,106,738	-		Psest_2914	0.37	-0.8
3,106,738	-		Psest_2914	0.37	+1.3
3,106,738	-		Psest_2914	0.37	+0.8
3,106,738	-		Psest_2914	0.37	-1.2
3,106,738	-		Psest_2914	0.37	+0.1
3,106,738	-		Psest_2914	0.37	-1.1
3,106,738	-		Psest_2914	0.37	+0.9
3,106,738	-		Psest_2914	0.37	+0.2
3,106,738	-		Psest_2914	0.37	+0.7
3,106,738	-		Psest_2914	0.37	+0.4