Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0083

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
83,736	+				+0.7
83,736	+				-1.3
83,736	+				-1.7
83,736	+				-0.3
83,736	+				+0.5
83,736	+				-0.8
83,736	+				+0.7
83,736	+				+0.2
83,736	+				+1.8
83,736	+				-0.9
83,737	-				-0.4
83,737	-				+0.3
83,737	-				+1.2
83,737	-				-0.8
83,737	-				-0.1
83,737	-				+0.0
83,737	-				-1.6
83,737	-				+1.3
83,737	-				-1.3
83,737	-				+2.1
83,737	-				+0.6
83,737	-				-1.7
83,737	-				+0.0
83,737	-				-1.1
83,737	-				+0.7
83,737	-				+1.4
83,737	-				-1.2
83,739	+				+1.4
83,740	-				-0.8
83,823	-				-0.2
83,823	-				+0.1
83,839	+				+1.0
83,839	+				-1.1
83,839	+				+1.9
83,844	+				+0.6
83,844	+				-0.4
83,844	+				-0.7
83,844	+				-0.0
83,845	-				-0.8
84,005	-				+1.5
84,028	+				-1.1
84,028	+				+0.5
84,028	+				+1.8
84,028	+				-0.5
84,028	+				-1.1
84,028	+				-0.1
84,028	+				+1.0
84,028	+				-0.9
84,029	-				-1.3
84,029	-				-1.0
84,029	-				-0.8
84,029	-				+3.1
84,029	-				+1.6
84,029	-				+1.8
84,029	-				+0.2
84,029	-				-0.6
84,029	-				-2.7
84,029	-				+1.0
84,120	+				+0.5
84,120	+				+2.1
84,121	-				-0.3
84,121	-				-0.4
84,121	-				+0.3
84,121	-				+0.5
84,121	-				-0.1
84,121	-				-0.7
84,221	+				+2.3
84,222	-				+1.2
84,499	-				-0.7
84,591	-				+1.5
84,591	-				+0.1
84,591	-				+0.7
84,605	-				-0.6
84,707	+				+1.8
84,707	+				-0.2
84,707	+				-1.0
84,800	-		Psest_0083	0.31	-2.3
84,800	-		Psest_0083	0.31	-0.7
84,863	-		Psest_0083	0.46	+0.3
84,971	-		Psest_0083	0.73	-0.7
85,241	+				+1.4
85,241	+				-0.8
85,241	+				-1.4
85,241	+				-2.4
85,241	+				+0.3
85,242	-				-3.1
85,242	-				-0.7
85,242	-				-1.0
85,242	-				-1.2
85,242	-				+0.6
85,242	-				+0.9
85,242	-				+2.5
85,242	-				+0.5
85,302	+		Psest_0084	0.11	-1.2
85,302	+		Psest_0084	0.11	-1.0
85,302	+		Psest_0084	0.11	-0.1
85,302	+		Psest_0084	0.11	+1.3
85,302	+		Psest_0084	0.11	+2.7
85,302	+		Psest_0084	0.11	-1.4
85,302	+		Psest_0084	0.11	+0.8
85,303	-		Psest_0084	0.11	+0.7
85,303	-		Psest_0084	0.11	+1.4
85,303	-		Psest_0084	0.11	-1.0
85,303	-		Psest_0084	0.11	-2.0
85,303	-		Psest_0084	0.11	+3.4
85,303	-		Psest_0084	0.11	-0.3
85,303	-		Psest_0084	0.11	-1.3
85,303	-		Psest_0084	0.11	+1.4
85,350	+		Psest_0084	0.13	-1.3
85,350	+		Psest_0084	0.13	+0.2
85,350	+		Psest_0084	0.13	-1.2
85,350	+		Psest_0084	0.13	-0.0
85,350	+		Psest_0084	0.13	+1.2
85,351	-		Psest_0084	0.13	-1.0
85,351	-		Psest_0084	0.13	+0.4
85,351	-		Psest_0084	0.13	+0.1
85,351	-		Psest_0084	0.13	+0.6
85,497	+		Psest_0084	0.21	+1.0
85,497	+		Psest_0084	0.21	-2.3
85,497	+		Psest_0084	0.21	-0.8
85,497	+		Psest_0084	0.21	+0.3
85,497	+		Psest_0084	0.21	+3.0
85,498	-		Psest_0084	0.21	+2.3
85,498	-		Psest_0084	0.21	+0.3
85,578	+		Psest_0084	0.25	-0.9
85,578	+		Psest_0084	0.25	+0.7
85,578	+		Psest_0084	0.25	-0.0
85,578	+		Psest_0084	0.25	-0.7
85,578	+		Psest_0084	0.25	+1.1
85,578	+		Psest_0084	0.25	-1.9
85,578	+		Psest_0084	0.25	-0.5
85,578	+		Psest_0084	0.25	+1.0
85,578	+		Psest_0084	0.25	-2.0
85,579	-		Psest_0084	0.25	+1.2
85,678	-		Psest_0084	0.30	-0.7
85,844	+		Psest_0084	0.38	-1.1
85,845	-		Psest_0084	0.38	-0.1