Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4349

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
4,548,409	-				-0.3
4,548,422	+				-2.8
4,548,548	-				+0.0
4,548,548	-				-0.5
4,548,603	+		Psest_4348	0.12	-1.0
4,548,604	-		Psest_4348	0.12	+0.3
4,548,604	-		Psest_4348	0.12	-0.6
4,548,814	+		Psest_4348	0.50	-1.1
4,548,823	+		Psest_4348	0.52	+0.6
4,548,823	+		Psest_4348	0.52	-0.1
4,548,823	+		Psest_4348	0.52	+0.1
4,548,823	+		Psest_4348	0.52	+0.3
4,548,823	+		Psest_4348	0.52	-0.7
4,548,824	-		Psest_4348	0.52	-0.3
4,548,824	-		Psest_4348	0.52	-2.0
4,548,846	+		Psest_4348	0.56	-1.7
4,548,847	-		Psest_4348	0.56	-1.5
4,548,847	-		Psest_4348	0.56	-1.1
4,548,847	-		Psest_4348	0.56	+0.8
4,548,847	-		Psest_4348	0.56	-0.1
4,548,895	+		Psest_4348	0.65	-0.5
4,548,896	-		Psest_4348	0.65	+1.5
4,549,061	+				+1.6
4,549,062	-				+0.8
4,549,078	-				-1.4
4,549,083	+				+1.3
4,549,084	-				+1.2
4,549,084	-				+0.1
4,549,084	-				+1.7
4,549,084	-				-0.1
4,551,226	-		Psest_4350	0.28	-1.6
4,551,226	-		Psest_4350	0.28	+1.3
4,551,226	-		Psest_4350	0.28	-0.9
4,551,243	-		Psest_4350	0.30	-1.6
4,551,560	-		Psest_4350	0.71	-0.4
4,551,560	-		Psest_4350	0.71	-0.4
4,551,560	-		Psest_4350	0.71	+0.8
4,551,576	+		Psest_4350	0.73	-1.6
4,551,576	+		Psest_4350	0.73	-2.8
4,551,576	+		Psest_4350	0.73	+0.2
4,551,576	+		Psest_4350	0.73	-3.1
4,551,576	+		Psest_4350	0.73	-2.9
4,551,577	-		Psest_4350	0.73	-0.1
4,551,577	-		Psest_4350	0.73	-0.3
4,551,577	-		Psest_4350	0.73	+0.8
4,551,793	-				-0.3