Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3455

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,626,612	-		Psest_3453	0.82	-1.3
3,626,835	+				+0.0
3,626,917	+				-1.9
3,626,918	-				+1.1
3,626,935	+				+1.2
3,626,935	+				-0.2
3,626,936	-				+0.8
3,627,192	-		Psest_3454	0.37	-0.8
3,627,443	+				-1.0
3,627,443	+				-1.3
3,627,443	+				+1.4
3,627,444	-				+1.4
3,627,449	+				-1.0
3,627,450	-				-1.0
3,627,639	+		Psest_3455	0.35	+0.8
3,627,639	+		Psest_3455	0.35	+2.2
3,627,640	-		Psest_3455	0.35	+1.7
3,627,640	-		Psest_3455	0.35	+0.0
3,628,020	+				+1.6
3,628,021	-				+0.1
3,628,021	-				+1.0
3,628,021	-				+0.7
3,628,021	-				-0.6
3,628,032	-				-0.2
3,628,034	+				+0.2
3,628,035	-				+1.1
3,628,517	-		Psest_3456	0.78	+1.0
3,628,517	-		Psest_3456	0.78	+0.9
3,628,517	-		Psest_3456	0.78	-2.2
3,628,668	-				-1.9
3,628,668	-				-0.0