Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3073

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,248,324	-		Psest_3072	0.17	-1.7
3,248,327	-		Psest_3072	0.18	-0.7
3,248,327	-		Psest_3072	0.18	+0.3
3,248,338	+		Psest_3072	0.19	-0.2
3,248,339	-		Psest_3072	0.19	+0.3
3,248,701	+		Psest_3072	0.61	+0.2
3,248,701	+		Psest_3072	0.61	+0.2
3,248,701	+		Psest_3072	0.61	-0.3
3,248,853	-		Psest_3072	0.79	+0.2
3,248,863	+		Psest_3072	0.80	-0.5
3,248,864	-		Psest_3072	0.80	+1.2
3,248,954	+				+0.4
3,249,059	-				+1.4
3,249,166	+				+0.3
3,249,174	+				+2.3
3,249,174	+				+0.9
3,249,175	-				+0.8
3,249,219	-				-0.6
3,249,441	+		Psest_3073	0.20	+1.6
3,249,441	+		Psest_3073	0.20	-0.1
3,249,441	+		Psest_3073	0.20	+0.3
3,249,441	+		Psest_3073	0.20	+1.6
3,249,441	+		Psest_3073	0.20	-0.6
3,249,442	-		Psest_3073	0.20	+0.4
3,249,442	-		Psest_3073	0.20	+2.4
3,249,442	-		Psest_3073	0.20	+1.0
3,249,518	+		Psest_3073	0.29	+2.4
3,249,518	+		Psest_3073	0.29	-1.0
3,249,518	+		Psest_3073	0.29	-1.2
3,249,519	-		Psest_3073	0.29	+1.0
3,249,519	-		Psest_3073	0.29	+0.5
3,249,519	-		Psest_3073	0.29	+1.3
3,249,519	-		Psest_3073	0.29	-0.5
3,249,519	-		Psest_3073	0.29	+0.1
3,249,565	+		Psest_3073	0.35	+1.5
3,249,566	-		Psest_3073	0.35	+0.6
3,249,620	+		Psest_3073	0.41	-1.1
3,249,620	+		Psest_3073	0.41	-0.0
3,249,620	+		Psest_3073	0.41	+2.3
3,249,620	+		Psest_3073	0.41	+2.0
3,249,620	+		Psest_3073	0.41	-3.0
3,249,620	+		Psest_3073	0.41	-2.1
3,249,620	+		Psest_3073	0.41	-0.2
3,249,620	+		Psest_3073	0.41	+0.3
3,249,621	-		Psest_3073	0.41	-1.5
3,249,621	-		Psest_3073	0.41	+0.7
3,249,621	-		Psest_3073	0.41	+2.2
3,249,621	-		Psest_3073	0.41	+0.7
3,249,621	-		Psest_3073	0.41	-0.3
3,249,621	-		Psest_3073	0.41	-0.6
3,249,621	-		Psest_3073	0.41	-1.4
3,249,621	-		Psest_3073	0.41	+2.5
3,249,621	-		Psest_3073	0.41	-0.6
3,249,697	+		Psest_3073	0.50	-1.4
3,249,697	+		Psest_3073	0.50	-0.9
3,249,697	+		Psest_3073	0.50	-2.3
3,249,697	+		Psest_3073	0.50	-2.7
3,249,697	+		Psest_3073	0.50	+1.4
3,249,698	-		Psest_3073	0.50	+0.4
3,249,698	-		Psest_3073	0.50	+2.7
3,249,698	-		Psest_3073	0.50	+0.6
3,249,698	-		Psest_3073	0.50	+0.6
3,249,698	-		Psest_3073	0.50	-1.7
3,249,698	-		Psest_3073	0.50	+1.3
3,249,698	-		Psest_3073	0.50	+0.1
3,249,698	-		Psest_3073	0.50	+0.5
3,249,808	+		Psest_3073	0.63	-1.6
3,249,808	+		Psest_3073	0.63	-0.0
3,249,808	+		Psest_3073	0.63	-0.4
3,249,808	+		Psest_3073	0.63	+0.9
3,249,809	-		Psest_3073	0.64	-0.4
3,249,809	-		Psest_3073	0.64	-1.9
3,249,847	+		Psest_3073	0.68	-0.4
3,249,848	-		Psest_3073	0.68	-0.2
3,249,848	-		Psest_3073	0.68	+2.3
3,249,848	-		Psest_3073	0.68	-0.0
3,249,851	+		Psest_3073	0.69	-0.5
3,249,852	-		Psest_3073	0.69	+4.2
3,249,872	-		Psest_3073	0.71	+0.3
3,250,121	+				-2.6
3,250,122	-				+1.9
3,250,122	-				+1.2
3,250,385	+				+2.7
3,250,385	+				-0.6
3,250,385	+				+0.2
3,250,385	+				+0.5
3,250,386	-				-0.6
3,250,386	-				-2.0
3,250,386	-				-1.0
3,250,440	+		Psest_3074	0.14	+1.6
3,250,440	+		Psest_3074	0.14	-0.2
3,250,440	+		Psest_3074	0.14	-0.9
3,250,441	-		Psest_3074	0.15	-1.5
3,250,444	+		Psest_3074	0.15	-0.1
3,250,444	+		Psest_3074	0.15	-2.0
3,250,444	+		Psest_3074	0.15	+1.8
3,250,594	-		Psest_3074	0.33	+2.0
3,250,594	-		Psest_3074	0.33	-1.1
3,250,599	+		Psest_3074	0.34	+0.8
3,250,599	+		Psest_3074	0.34	-0.2
3,250,600	-		Psest_3074	0.34	-2.1
3,250,600	-		Psest_3074	0.34	+0.6
3,250,603	+		Psest_3074	0.34	-0.5
3,250,603	+		Psest_3074	0.34	+0.7
3,250,603	+		Psest_3074	0.34	-0.0
3,250,626	+		Psest_3074	0.37	-0.4
3,250,626	+		Psest_3074	0.37	+3.7
3,250,627	-		Psest_3074	0.37	+2.1
3,250,787	-		Psest_3074	0.57	-0.7
3,250,847	+		Psest_3074	0.64	-0.9
3,250,847	+		Psest_3074	0.64	-1.7
3,250,847	+		Psest_3074	0.64	+0.9
3,250,848	-		Psest_3074	0.64	+1.3
3,250,848	-		Psest_3074	0.64	+0.5
3,251,040	+		Psest_3074	0.88	+3.1
3,251,041	-		Psest_3074	0.88	+0.2
3,251,081	+				+1.2
3,251,081	+				+0.0
3,251,081	+				+0.6
3,251,082	-				+0.4