Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3024

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
3,210,010	+		Psest_3021	0.73	+0.5
3,210,010	+		Psest_3021	0.73	+0.9
3,210,010	+		Psest_3021	0.73	+0.2
3,210,011	-		Psest_3021	0.73	+2.4
3,210,097	+		Psest_3021	0.84	+0.8
3,210,098	-		Psest_3021	0.85	+0.7
3,210,098	-		Psest_3021	0.85	+0.8
3,210,098	-		Psest_3021	0.85	+0.6
3,210,098	-		Psest_3021	0.85	-0.7
3,210,119	-		Psest_3021	0.87	-0.0
3,210,210	-				+0.1
3,210,304	+				-1.8
3,210,351	+				+0.9
3,210,351	+				+0.9
3,210,351	+				+0.6
3,210,352	-				+1.6
3,210,352	-				+1.2
3,210,352	-				+0.6
3,210,352	-				+0.3
3,210,352	-				-0.8
3,210,352	-				-1.1
3,210,352	-				+0.6
3,210,352	-				-1.7
3,210,470	+		Psest_3022	0.41	-0.4
3,210,470	+		Psest_3022	0.41	+0.6
3,210,470	+		Psest_3022	0.41	-0.2
3,210,471	-		Psest_3022	0.42	-0.5
3,210,471	-		Psest_3022	0.42	+2.1
3,210,471	-		Psest_3022	0.42	-0.5
3,210,471	-		Psest_3022	0.42	-1.5
3,210,522	+		Psest_3022	0.59	+0.6
3,210,523	-		Psest_3022	0.59	+0.2
3,210,743	+				-1.3
3,210,744	-				+0.1
3,210,744	-				-0.7
3,210,744	-				+0.8
3,210,750	+				+1.8
3,210,750	+				+0.3
3,210,750	+				+0.2
3,210,750	+				-1.0
3,210,750	+				-0.9
3,210,750	+				-0.7
3,210,750	+				-1.8
3,210,751	-				+0.1
3,210,751	-				+0.2
3,210,751	-				-0.6
3,210,751	-				-0.5
3,210,751	-				+0.6
3,210,751	-				+1.2
3,210,751	-				+0.8
3,210,751	-				-0.4
3,210,751	-				+0.6
3,210,751	-				-1.0
3,210,751	-				-1.8
3,210,751	-				-1.6
3,210,751	-				+0.5
3,210,751	-				+1.3
3,210,751	-				-0.9
3,210,751	-				+1.6
3,210,751	-				+0.6
3,210,751	-				-0.8
3,210,751	-				-0.5
3,210,803	+				+0.6
3,210,804	-				-0.5
3,210,804	-				-1.6
3,210,863	+				-0.9
3,210,864	-				-1.3
3,210,864	-				+3.1
3,210,864	-				+1.5
3,210,864	-				-1.9
3,210,864	-				+0.2
3,210,879	-				+0.4
3,210,940	-		Psest_3024	0.12	-0.2
3,210,940	-		Psest_3024	0.12	+0.1
3,211,163	+		Psest_3024	0.32	-1.8
3,211,163	+		Psest_3024	0.32	-0.4
3,211,163	+		Psest_3024	0.32	-1.8
3,211,163	+		Psest_3024	0.32	+1.2
3,211,164	-		Psest_3024	0.32	-1.9
3,211,164	-		Psest_3024	0.32	-0.1
3,211,164	-		Psest_3024	0.32	+0.9
3,211,164	-		Psest_3024	0.32	-0.6
3,211,164	-		Psest_3024	0.32	-0.9
3,211,164	-		Psest_3024	0.32	+0.6
3,211,312	+		Psest_3024	0.45	+0.3
3,211,472	+		Psest_3024	0.59	+0.1
3,211,473	-		Psest_3024	0.59	-1.5
3,212,142	+		Psest_3025	0.12	+0.7
3,212,142	+		Psest_3025	0.12	+0.3
3,212,142	+		Psest_3025	0.12	+0.9
3,212,142	+		Psest_3025	0.12	+0.7
3,212,142	+		Psest_3025	0.12	-2.1
3,212,142	+		Psest_3025	0.12	-0.1
3,212,143	-		Psest_3025	0.12	-1.2
3,212,143	-		Psest_3025	0.12	-0.3
3,212,176	+		Psest_3025	0.14	+2.3
3,212,262	+		Psest_3025	0.19	+0.4
3,212,262	+		Psest_3025	0.19	+0.5
3,212,262	+		Psest_3025	0.19	+0.7
3,212,263	-		Psest_3025	0.19	-0.1
3,212,263	-		Psest_3025	0.19	-0.8
3,212,508	+		Psest_3025	0.34	-2.0
3,212,508	+		Psest_3025	0.34	+1.2
3,212,509	-		Psest_3025	0.34	-0.2
3,212,509	-		Psest_3025	0.34	-1.2
3,212,509	-		Psest_3025	0.34	+0.6
3,212,594	+		Psest_3025	0.39	+0.8
3,212,594	+		Psest_3025	0.39	+1.2
3,212,594	+		Psest_3025	0.39	+0.8
3,212,595	-		Psest_3025	0.39	-1.4
3,212,595	-		Psest_3025	0.39	+0.7
3,212,699	-		Psest_3025	0.46	+0.8
3,212,736	+		Psest_3025	0.48	+1.4
3,212,737	-		Psest_3025	0.48	+0.4