Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2335

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
2,487,872	+		Psest_2334	0.15	-0.5
2,487,873	-		Psest_2334	0.15	-1.8
2,487,873	-		Psest_2334	0.15	-2.0
2,487,952	+		Psest_2334	0.23	-1.3
2,487,953	-		Psest_2334	0.23	-2.2
2,487,953	-		Psest_2334	0.23	-1.1
2,487,983	-		Psest_2334	0.27	+0.4
2,488,150	+		Psest_2334	0.44	+0.2
2,488,151	-		Psest_2334	0.44	-0.6
2,488,151	-		Psest_2334	0.44	+1.3
2,488,274	+		Psest_2334	0.57	-1.5
2,488,274	+		Psest_2334	0.57	-1.3
2,488,274	+		Psest_2334	0.57	-0.1
2,488,274	+		Psest_2334	0.57	-1.4
2,488,275	-		Psest_2334	0.57	-2.8
2,488,275	-		Psest_2334	0.57	-1.4
2,488,275	-		Psest_2334	0.57	-1.5
2,488,275	-		Psest_2334	0.57	-1.1
2,488,331	+		Psest_2334	0.63	-1.3
2,488,331	+		Psest_2334	0.63	-0.3
2,488,331	+		Psest_2334	0.63	-1.1
2,488,331	+		Psest_2334	0.63	-0.7
2,488,331	+		Psest_2334	0.63	+0.4
2,488,332	-		Psest_2334	0.63	-1.5
2,488,332	-		Psest_2334	0.63	-1.9
2,488,332	-		Psest_2334	0.63	-1.3
2,488,332	-		Psest_2334	0.63	-0.8
2,488,332	-		Psest_2334	0.63	-0.4
2,488,332	-		Psest_2334	0.63	+0.3
2,488,332	-		Psest_2334	0.63	-1.1
2,488,332	-		Psest_2334	0.63	+0.8
2,488,357	+		Psest_2334	0.65	+0.4
2,488,358	-		Psest_2334	0.65	-0.6
2,488,360	+		Psest_2334	0.66	+0.3
2,488,360	+		Psest_2334	0.66	-0.8
2,488,360	+		Psest_2334	0.66	-3.3
2,488,360	+		Psest_2334	0.66	-0.5
2,488,360	+		Psest_2334	0.66	+0.0
2,488,360	+		Psest_2334	0.66	-0.8
2,488,360	+		Psest_2334	0.66	-1.9
2,488,360	+		Psest_2334	0.66	-0.8
2,488,360	+		Psest_2334	0.66	-0.6
2,488,361	-		Psest_2334	0.66	-1.0
2,488,361	-		Psest_2334	0.66	-0.1
2,488,361	-		Psest_2334	0.66	+0.1
2,488,361	-		Psest_2334	0.66	-0.6
2,488,361	-		Psest_2334	0.66	+0.2
2,488,363	+		Psest_2334	0.66	-0.3
2,488,363	+		Psest_2334	0.66	+0.4
2,488,363	+		Psest_2334	0.66	-0.3
2,488,363	+		Psest_2334	0.66	+0.0
2,488,364	-		Psest_2334	0.66	-0.2
2,488,382	+		Psest_2334	0.68	-0.6
2,488,383	-		Psest_2334	0.68	+0.0
2,488,550	-		Psest_2334	0.85	-0.4
2,488,550	-		Psest_2334	0.85	-3.1
2,488,550	-		Psest_2334	0.85	-0.4
2,488,550	-		Psest_2334	0.85	-0.7
2,488,734	+				-0.5
2,488,734	+				-1.3
2,488,760	-				-0.8
2,489,014	+				+1.4
2,489,067	+				+1.4
2,489,154	+		Psest_2336	0.12	-1.0
2,489,154	+		Psest_2336	0.12	+0.4
2,489,154	+		Psest_2336	0.12	-2.9
2,489,155	-		Psest_2336	0.12	-0.9
2,489,213	+		Psest_2336	0.21	-2.8
2,489,213	+		Psest_2336	0.21	-1.4
2,489,213	+		Psest_2336	0.21	-1.0
2,489,213	+		Psest_2336	0.21	+0.3
2,489,213	+		Psest_2336	0.21	-0.6
2,489,213	+		Psest_2336	0.21	-0.4
2,489,213	+		Psest_2336	0.21	+0.5
2,489,213	+		Psest_2336	0.21	-0.6
2,489,213	+		Psest_2336	0.21	-0.3
2,489,214	-		Psest_2336	0.22	-2.0
2,489,214	-		Psest_2336	0.22	-1.2
2,489,214	-		Psest_2336	0.22	-2.3
2,489,214	-		Psest_2336	0.22	-0.5
2,489,214	-		Psest_2336	0.22	-0.0
2,489,214	-		Psest_2336	0.22	-0.2
2,489,214	-		Psest_2336	0.22	+2.4
2,489,214	-		Psest_2336	0.22	+1.3
2,489,295	+		Psest_2336	0.35	+1.0
2,489,295	+		Psest_2336	0.35	-0.2
2,489,296	-		Psest_2336	0.35	-0.4
2,489,446	+		Psest_2336	0.60	-0.0
2,489,496	+		Psest_2336	0.68	+1.2
2,489,496	+		Psest_2336	0.68	-1.0
2,489,598	+		Psest_2336	0.85	+1.7
2,489,599	-		Psest_2336	0.85	+1.1
2,489,599	-		Psest_2336	0.85	-1.0
2,489,602	-		Psest_2336	0.86	+0.7
2,489,682	+				+1.6
2,489,682	+				+0.4
2,489,683	-				-0.6
2,489,683	-				+0.9
2,489,683	-				-0.3
2,489,683	-				-0.3
2,489,733	-				+0.1
2,489,788	+		Psest_2337	0.13	-0.4
2,489,789	-		Psest_2337	0.13	-1.4