Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2048

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
2,169,044	+		Psest_2047	0.32	+0.5
2,169,120	-		Psest_2047	0.38	-0.9
2,169,353	-		Psest_2047	0.56	+0.6
2,169,459	-		Psest_2047	0.65	+0.7
2,169,459	-		Psest_2047	0.65	-0.7
2,169,945	+				+0.9
2,170,198	-		Psest_2048	0.45	-0.3
2,170,424	-		Psest_2048	0.79	-1.5
2,170,516	+				-2.0
2,170,516	+				+0.8
2,170,714	+				+1.3
2,170,715	-				-3.6
2,170,728	+				+0.0
2,170,778	-				+0.1
2,171,228	+		Psest_2049	0.13	-2.0
2,171,228	+		Psest_2049	0.13	-1.3
2,171,229	-		Psest_2049	0.13	+0.9
2,171,394	-		Psest_2049	0.21	+0.4
2,171,405	-		Psest_2049	0.21	-0.7