Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1699

Experiment: Vanillin 2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 2 mM
1,804,551	+		Psest_1697	0.53	+0.4
1,804,551	+		Psest_1697	0.53	+0.5
1,804,551	+		Psest_1697	0.53	+2.1
1,804,551	+		Psest_1697	0.53	-0.8
1,804,551	+		Psest_1697	0.53	-0.5
1,804,551	+		Psest_1697	0.53	-3.3
1,804,551	+		Psest_1697	0.53	-0.4
1,804,552	-		Psest_1697	0.53	+0.3
1,804,552	-		Psest_1697	0.53	+0.8
1,804,552	-		Psest_1697	0.53	-0.9
1,804,552	-		Psest_1697	0.53	-1.5
1,804,552	-		Psest_1697	0.53	-0.9
1,804,553	+		Psest_1697	0.53	-0.9
1,804,553	+		Psest_1697	0.53	+2.5
1,804,555	+		Psest_1697	0.54	+2.2
1,804,555	+		Psest_1697	0.54	+0.2
1,804,555	+		Psest_1697	0.54	+0.0
1,804,555	+		Psest_1697	0.54	+0.7
1,804,555	+		Psest_1697	0.54	-0.6
1,804,555	+		Psest_1697	0.54	-0.8
1,804,555	+		Psest_1697	0.54	-0.5
1,804,555	+		Psest_1697	0.54	+1.5
1,804,555	+		Psest_1697	0.54	-0.5
1,804,555	+		Psest_1697	0.54	+0.7
1,804,555	+		Psest_1697	0.54	+1.0
1,804,555	+		Psest_1697	0.54	+1.3
1,804,555	+		Psest_1697	0.54	-0.8
1,804,555	+		Psest_1697	0.54	-1.7
1,804,555	+		Psest_1697	0.54	-1.5
1,804,555	+		Psest_1697	0.54	-0.9
1,804,555	+		Psest_1697	0.54	-1.2
1,804,555	+		Psest_1697	0.54	+0.1
1,804,555	+		Psest_1697	0.54	-1.0
1,804,555	+		Psest_1697	0.54	+0.4
1,804,556	-		Psest_1697	0.54	+0.0
1,804,556	-		Psest_1697	0.54	+0.8
1,804,556	-		Psest_1697	0.54	-0.6
1,804,556	-		Psest_1697	0.54	+3.1
1,804,556	-		Psest_1697	0.54	-0.5
1,804,556	-		Psest_1697	0.54	+0.3
1,804,556	-		Psest_1697	0.54	+1.0
1,804,556	-		Psest_1697	0.54	-1.8
1,804,584	+		Psest_1697	0.56	-1.2
1,804,746	+		Psest_1697	0.67	+1.4
1,804,813	+		Psest_1697	0.72	-2.1
1,804,813	+		Psest_1697	0.72	-1.7
1,804,887	+		Psest_1697	0.77	-0.8
1,804,887	+		Psest_1697	0.77	-0.3
1,805,052	+		Psest_1697	0.89	-0.5
1,805,052	+		Psest_1697	0.89	+1.5
1,805,052	+		Psest_1697	0.89	-0.4
1,805,052	+		Psest_1697	0.89	+0.7
1,805,052	+		Psest_1697	0.89	-2.0
1,805,052	+		Psest_1697	0.89	-1.0
1,805,053	-		Psest_1697	0.89	+1.0
1,805,053	-		Psest_1697	0.89	+0.0
1,805,080	+				-0.9
1,805,081	-				-0.5
1,805,081	-				-0.2
1,805,262	+				-1.9
1,805,262	+				+0.3
1,805,263	-				+2.0
1,805,268	+				-0.4
1,805,268	+				-0.4
1,805,284	+				+1.9
1,805,284	+				-1.1
1,805,329	+				-1.8
1,805,329	+				-0.4
1,805,330	-				+0.7
1,805,337	+				-0.5
1,805,337	+				+0.1
1,805,338	-				+0.1
1,805,338	-				+1.1
1,805,338	-				-0.2
1,805,338	-				+2.2
1,805,338	-				+0.4
1,805,397	+				+1.6
1,805,398	-				+0.5
1,805,398	-				-1.0
1,805,398	-				-0.9
1,805,483	+				-1.6
1,805,484	-				+0.3
1,805,484	-				-0.5
1,805,484	-				+0.3
1,805,940	+		Psest_1699	0.46	+0.2
1,805,941	-		Psest_1699	0.46	-0.3
1,806,093	-		Psest_1699	0.59	-1.9
1,806,394	+		Psest_1699	0.86	-0.2
1,806,394	+		Psest_1699	0.86	-2.2
1,806,395	-		Psest_1699	0.86	-1.3
1,806,395	-		Psest_1699	0.86	-0.6
1,806,524	-				+0.3
1,806,544	+				-2.1
1,806,587	+				-3.7
1,806,781	+		Psest_1700	0.24	-0.4
1,806,781	+		Psest_1700	0.24	-0.4
1,806,782	-		Psest_1700	0.24	+0.4
1,806,782	-		Psest_1700	0.24	-0.5
1,806,811	+		Psest_1700	0.29	-1.0
1,806,811	+		Psest_1700	0.29	-0.7
1,806,904	+		Psest_1700	0.44	-1.7
1,806,904	+		Psest_1700	0.44	+1.8
1,806,904	+		Psest_1700	0.44	+0.6
1,807,096	+		Psest_1700	0.75	+0.5
1,807,310	+				+1.3
1,807,310	+				+1.2
1,807,310	+				-0.5
1,807,314	+				+0.6
1,807,314	+				+1.5
1,807,314	+				+1.3
1,807,315	-				-1.2
1,807,315	-				+1.5
1,807,315	-				-0.5
1,807,409	+		Psest_1701	0.14	+1.6
1,807,409	+		Psest_1701	0.14	-0.8
1,807,409	+		Psest_1701	0.14	-2.2
1,807,409	+		Psest_1701	0.14	+2.5
1,807,409	+		Psest_1701	0.14	+2.6
1,807,409	+		Psest_1701	0.14	+3.1
1,807,409	+		Psest_1701	0.14	-0.0
1,807,409	+		Psest_1701	0.14	+1.2
1,807,409	+		Psest_1701	0.14	+0.5
1,807,410	-		Psest_1701	0.14	+0.8
1,807,410	-		Psest_1701	0.14	+3.9
1,807,410	-		Psest_1701	0.14	-0.8
1,807,410	-		Psest_1701	0.14	+2.8
1,807,410	-		Psest_1701	0.14	-1.3
1,807,410	-		Psest_1701	0.14	+1.1
1,807,410	-		Psest_1701	0.14	+2.8