Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4141 and Psest_4142 are separated by 11 nucleotides Psest_4142 and Psest_4143 are separated by 16 nucleotides Psest_4143 and Psest_4144 are separated by 37 nucleotides
Psest_4141: Psest_4141 - 3-carboxymuconate cyclase, at 4,324,135 to 4,325,328
_4141
Psest_4142: Psest_4142 - hypothetical protein, at 4,325,340 to 4,326,377
_4142
Psest_4143: Psest_4143 - flagellar hook-associated protein 3, at 4,326,394 to 4,327,302
_4143
Psest_4144: Psest_4144 - flagellar hook-associated protein FlgK, at 4,327,340 to 4,328,719
_4144
Position (kb)
4325
4326
4327 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4324.402 kb on + strand, within Psest_4141 at 4324.473 kb on + strand, within Psest_4141 at 4324.473 kb on + strand, within Psest_4141 at 4324.474 kb on - strand, within Psest_4141 at 4324.474 kb on - strand, within Psest_4141 at 4324.573 kb on + strand, within Psest_4141 at 4324.573 kb on + strand, within Psest_4141 at 4324.573 kb on + strand, within Psest_4141 at 4324.574 kb on - strand, within Psest_4141 at 4324.574 kb on - strand, within Psest_4141 at 4324.903 kb on + strand, within Psest_4141 at 4324.903 kb on + strand, within Psest_4141 at 4324.945 kb on + strand, within Psest_4141 at 4324.946 kb on - strand, within Psest_4141 at 4324.946 kb on - strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.031 kb on + strand, within Psest_4141 at 4325.032 kb on - strand, within Psest_4141 at 4325.032 kb on - strand, within Psest_4141 at 4325.032 kb on - strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.056 kb on + strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.057 kb on - strand, within Psest_4141 at 4325.536 kb on - strand, within Psest_4142 at 4326.078 kb on - strand, within Psest_4142 at 4326.173 kb on - strand, within Psest_4142 at 4326.396 kb on - strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.434 kb on + strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.435 kb on - strand at 4326.467 kb on + strand at 4326.467 kb on + strand at 4326.468 kb on - strand at 4326.468 kb on - strand at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.497 kb on + strand, within Psest_4143 at 4326.498 kb on - strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.845 kb on + strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.846 kb on - strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.849 kb on + strand, within Psest_4143 at 4326.850 kb on - strand, within Psest_4143 at 4326.850 kb on - strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.105 kb on + strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143 at 4327.106 kb on - strand, within Psest_4143
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 4,324,402 + Psest_4141 0.22 -0.0 4,324,473 + Psest_4141 0.28 +2.3 4,324,473 + Psest_4141 0.28 -0.2 4,324,474 - Psest_4141 0.28 +0.2 4,324,474 - Psest_4141 0.28 -0.5 4,324,573 + Psest_4141 0.37 +1.8 4,324,573 + Psest_4141 0.37 -2.8 4,324,573 + Psest_4141 0.37 -2.0 4,324,574 - Psest_4141 0.37 +0.8 4,324,574 - Psest_4141 0.37 +0.4 4,324,903 + Psest_4141 0.64 -1.3 4,324,903 + Psest_4141 0.64 -0.1 4,324,945 + Psest_4141 0.68 -0.5 4,324,946 - Psest_4141 0.68 -0.9 4,324,946 - Psest_4141 0.68 -2.5 4,325,031 + Psest_4141 0.75 -1.4 4,325,031 + Psest_4141 0.75 +1.1 4,325,031 + Psest_4141 0.75 -0.0 4,325,031 + Psest_4141 0.75 -1.9 4,325,032 - Psest_4141 0.75 +0.1 4,325,032 - Psest_4141 0.75 +0.9 4,325,032 - Psest_4141 0.75 -0.3 4,325,056 + Psest_4141 0.77 +1.3 4,325,056 + Psest_4141 0.77 -1.8 4,325,056 + Psest_4141 0.77 -0.4 4,325,056 + Psest_4141 0.77 +0.5 4,325,056 + Psest_4141 0.77 -0.3 4,325,056 + Psest_4141 0.77 +0.1 4,325,056 + Psest_4141 0.77 -2.3 4,325,056 + Psest_4141 0.77 -0.3 4,325,057 - Psest_4141 0.77 +1.2 4,325,057 - Psest_4141 0.77 -1.1 4,325,057 - Psest_4141 0.77 -1.2 4,325,057 - Psest_4141 0.77 +0.1 4,325,057 - Psest_4141 0.77 -2.0 4,325,057 - Psest_4141 0.77 +0.5 4,325,057 - Psest_4141 0.77 -1.8 4,325,057 - Psest_4141 0.77 +0.2 4,325,057 - Psest_4141 0.77 -1.4 4,325,057 - Psest_4141 0.77 -2.2 4,325,536 - Psest_4142 0.19 +0.7 4,326,078 - Psest_4142 0.71 +2.7 4,326,173 - Psest_4142 0.80 -0.6 4,326,396 - -0.4 4,326,434 + +1.0 4,326,434 + -0.7 4,326,434 + +0.7 4,326,434 + +1.0 4,326,434 + -0.3 4,326,434 + -0.0 4,326,434 + +0.1 4,326,435 - -0.4 4,326,435 - -0.5 4,326,435 - +0.3 4,326,435 - -1.0 4,326,435 - +0.6 4,326,435 - -1.5 4,326,467 + -0.9 4,326,467 + -0.0 4,326,468 - -0.5 4,326,468 - +2.2 4,326,497 + Psest_4143 0.11 -1.5 4,326,497 + Psest_4143 0.11 +0.4 4,326,497 + Psest_4143 0.11 -1.7 4,326,497 + Psest_4143 0.11 +0.5 4,326,497 + Psest_4143 0.11 -1.7 4,326,498 - Psest_4143 0.11 -0.8 4,326,845 + Psest_4143 0.50 +1.8 4,326,845 + Psest_4143 0.50 -2.2 4,326,845 + Psest_4143 0.50 +2.8 4,326,845 + Psest_4143 0.50 +0.1 4,326,845 + Psest_4143 0.50 -0.6 4,326,845 + Psest_4143 0.50 +2.8 4,326,845 + Psest_4143 0.50 +1.7 4,326,845 + Psest_4143 0.50 +0.1 4,326,845 + Psest_4143 0.50 -0.7 4,326,846 - Psest_4143 0.50 -1.3 4,326,846 - Psest_4143 0.50 -0.9 4,326,846 - Psest_4143 0.50 -1.5 4,326,846 - Psest_4143 0.50 -1.7 4,326,846 - Psest_4143 0.50 -1.8 4,326,846 - Psest_4143 0.50 -1.5 4,326,846 - Psest_4143 0.50 +0.4 4,326,846 - Psest_4143 0.50 -0.9 4,326,846 - Psest_4143 0.50 +0.3 4,326,846 - Psest_4143 0.50 -0.2 4,326,846 - Psest_4143 0.50 +0.2 4,326,849 + Psest_4143 0.50 +0.1 4,326,849 + Psest_4143 0.50 +0.6 4,326,849 + Psest_4143 0.50 +0.5 4,326,849 + Psest_4143 0.50 -0.2 4,326,849 + Psest_4143 0.50 +0.5 4,326,850 - Psest_4143 0.50 -0.2 4,326,850 - Psest_4143 0.50 +1.5 4,327,105 + Psest_4143 0.78 +0.1 4,327,105 + Psest_4143 0.78 -0.6 4,327,105 + Psest_4143 0.78 -0.4 4,327,105 + Psest_4143 0.78 +0.3 4,327,105 + Psest_4143 0.78 +0.9 4,327,106 - Psest_4143 0.78 -2.4 4,327,106 - Psest_4143 0.78 -1.8 4,327,106 - Psest_4143 0.78 +0.1 4,327,106 - Psest_4143 0.78 +2.3 4,327,106 - Psest_4143 0.78 -0.4 4,327,106 - Psest_4143 0.78 +0.4 4,327,106 - Psest_4143 0.78 -2.0
Or see this region's nucleotide sequence