Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3802 and Psest_3803 are separated by 3 nucleotides Psest_3803 and Psest_3804 are separated by 138 nucleotides
Psest_3802: Psest_3802 - hypothetical protein, at 3,971,944 to 3,973,287
_3802
Psest_3803: Psest_3803 - DNA repair protein radc, at 3,973,291 to 3,973,965
_3803
Psest_3804: Psest_3804 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic, at 3,974,104 to 3,975,312
_3804
Position (kb)
3973
3974 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3972.301 kb on + strand, within Psest_3802 at 3972.301 kb on + strand, within Psest_3802 at 3972.302 kb on - strand, within Psest_3802 at 3972.302 kb on - strand, within Psest_3802 at 3972.379 kb on + strand, within Psest_3802 at 3972.380 kb on - strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.397 kb on + strand, within Psest_3802 at 3972.398 kb on - strand, within Psest_3802 at 3972.398 kb on - strand, within Psest_3802 at 3972.398 kb on - strand, within Psest_3802 at 3972.435 kb on - strand, within Psest_3802 at 3972.833 kb on - strand, within Psest_3802 at 3972.833 kb on - strand, within Psest_3802 at 3972.833 kb on - strand, within Psest_3802 at 3972.834 kb on + strand, within Psest_3802 at 3972.863 kb on + strand, within Psest_3802 at 3972.863 kb on + strand, within Psest_3802 at 3972.864 kb on - strand, within Psest_3802 at 3973.305 kb on - strand at 3973.447 kb on - strand, within Psest_3803 at 3973.632 kb on - strand, within Psest_3803 at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.957 kb on + strand at 3973.958 kb on - strand at 3973.958 kb on - strand at 3974.014 kb on + strand at 3974.019 kb on + strand at 3974.103 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 3,972,301 + Psest_3802 0.27 -1.1 3,972,301 + Psest_3802 0.27 -0.8 3,972,302 - Psest_3802 0.27 -0.7 3,972,302 - Psest_3802 0.27 -0.9 3,972,379 + Psest_3802 0.32 +1.5 3,972,380 - Psest_3802 0.32 -1.3 3,972,397 + Psest_3802 0.34 +0.3 3,972,397 + Psest_3802 0.34 +0.7 3,972,397 + Psest_3802 0.34 -0.4 3,972,397 + Psest_3802 0.34 -1.6 3,972,397 + Psest_3802 0.34 +1.3 3,972,397 + Psest_3802 0.34 -0.8 3,972,398 - Psest_3802 0.34 -1.4 3,972,398 - Psest_3802 0.34 +0.9 3,972,398 - Psest_3802 0.34 -1.6 3,972,435 - Psest_3802 0.37 -0.9 3,972,833 - Psest_3802 0.66 +1.3 3,972,833 - Psest_3802 0.66 -0.8 3,972,833 - Psest_3802 0.66 +0.6 3,972,834 + Psest_3802 0.66 +1.8 3,972,863 + Psest_3802 0.68 +1.7 3,972,863 + Psest_3802 0.68 +0.9 3,972,864 - Psest_3802 0.68 -0.8 3,973,305 - +0.3 3,973,447 - Psest_3803 0.23 -2.0 3,973,632 - Psest_3803 0.51 -1.4 3,973,957 + -0.7 3,973,957 + -0.2 3,973,957 + +0.1 3,973,957 + +0.4 3,973,957 + +0.2 3,973,957 + +0.9 3,973,957 + +0.1 3,973,957 + +0.2 3,973,957 + +1.2 3,973,957 + +1.3 3,973,957 + -1.3 3,973,957 + -0.7 3,973,957 + -0.9 3,973,957 + +0.2 3,973,957 + +1.3 3,973,957 + +1.9 3,973,958 - -1.2 3,973,958 - -1.0 3,974,014 + -0.1 3,974,019 + -1.8 3,974,103 + +0.6
Or see this region's nucleotide sequence