Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3489 and Psest_3490 are separated by 241 nucleotides Psest_3490 and Psest_3491 overlap by 23 nucleotides Psest_3491 and Psest_3492 are separated by 169 nucleotides
Psest_3489: Psest_3489 - hypothetical protein, at 3,661,349 to 3,662,950
_3489
Psest_3490: Psest_3490 - Signal transduction histidine kinase, nitrate/nitrite-specific, at 3,663,192 to 3,665,195
_3490
Psest_3491: Psest_3491 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,665,173 to 3,665,781
_3491
Psest_3492: Psest_3492 - hypothetical protein, at 3,665,951 to 3,666,736
_3492
Position (kb)
3663
3664
3665
3666 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3662.393 kb on + strand, within Psest_3489 at 3662.393 kb on + strand, within Psest_3489 at 3662.393 kb on + strand, within Psest_3489 at 3662.393 kb on + strand, within Psest_3489 at 3663.204 kb on + strand at 3663.390 kb on + strand at 3663.391 kb on - strand at 3663.459 kb on + strand, within Psest_3490 at 3663.820 kb on - strand, within Psest_3490 at 3663.820 kb on - strand, within Psest_3490 at 3663.984 kb on + strand, within Psest_3490 at 3664.080 kb on + strand, within Psest_3490 at 3664.237 kb on - strand, within Psest_3490 at 3664.949 kb on + strand, within Psest_3490 at 3664.980 kb on + strand, within Psest_3490 at 3665.124 kb on + strand at 3665.125 kb on - strand at 3665.125 kb on - strand at 3665.125 kb on - strand at 3665.125 kb on - strand at 3665.883 kb on - strand at 3665.939 kb on + strand at 3665.939 kb on + strand at 3665.940 kb on - strand at 3665.940 kb on - strand at 3665.967 kb on + strand at 3666.092 kb on + strand, within Psest_3492 at 3666.092 kb on + strand, within Psest_3492 at 3666.093 kb on - strand, within Psest_3492 at 3666.093 kb on - strand, within Psest_3492 at 3666.093 kb on - strand, within Psest_3492
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 3,662,393 + Psest_3489 0.65 -0.5 3,662,393 + Psest_3489 0.65 -0.3 3,662,393 + Psest_3489 0.65 +0.8 3,662,393 + Psest_3489 0.65 -0.9 3,663,204 + +0.0 3,663,390 + +0.3 3,663,391 - +0.4 3,663,459 + Psest_3490 0.13 -0.9 3,663,820 - Psest_3490 0.31 -1.9 3,663,820 - Psest_3490 0.31 +0.2 3,663,984 + Psest_3490 0.40 -2.6 3,664,080 + Psest_3490 0.44 -1.6 3,664,237 - Psest_3490 0.52 -1.7 3,664,949 + Psest_3490 0.88 -4.0 3,664,980 + Psest_3490 0.89 +0.3 3,665,124 + -0.3 3,665,125 - +1.7 3,665,125 - -0.5 3,665,125 - -0.5 3,665,125 - +1.2 3,665,883 - -2.2 3,665,939 + -1.7 3,665,939 + -1.2 3,665,940 - +0.5 3,665,940 - -1.7 3,665,967 + -2.6 3,666,092 + Psest_3492 0.18 +1.0 3,666,092 + Psest_3492 0.18 +1.4 3,666,093 - Psest_3492 0.18 -0.3 3,666,093 - Psest_3492 0.18 +0.8 3,666,093 - Psest_3492 0.18 -1.0
Or see this region's nucleotide sequence