Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0311 and Psest_0312 are separated by 93 nucleotides Psest_0312 and Psest_0313 are separated by 236 nucleotides
Psest_0311: Psest_0311 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 332,631 to 334,055
_0311
Psest_0312: Psest_0312 - Superfamily II DNA and RNA helicases, at 334,149 to 335,966
_0312
Psest_0313: Psest_0313 - 5,10-methylenetetrahydrofolate reductase, prokaryotic form, at 336,203 to 337,132
_0313
Position (kb) 334
335
336 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 333.222 kb on + strand, within Psest_0311 at 333.223 kb on - strand, within Psest_0311 at 333.337 kb on - strand, within Psest_0311 at 333.472 kb on + strand, within Psest_0311 at 333.473 kb on - strand, within Psest_0311 at 333.473 kb on - strand, within Psest_0311 at 333.804 kb on + strand, within Psest_0311 at 333.805 kb on - strand, within Psest_0311 at 333.805 kb on - strand, within Psest_0311 at 333.856 kb on - strand, within Psest_0311 at 333.858 kb on + strand, within Psest_0311 at 333.858 kb on + strand, within Psest_0311 at 333.858 kb on + strand, within Psest_0311 at 333.858 kb on + strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.859 kb on - strand, within Psest_0311 at 333.896 kb on + strand, within Psest_0311 at 333.901 kb on - strand, within Psest_0311 at 333.901 kb on - strand, within Psest_0311 at 334.206 kb on + strand at 334.206 kb on + strand at 334.540 kb on + strand at 334.540 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.969 kb on + strand, within Psest_0312 at 334.970 kb on - strand, within Psest_0312 at 334.970 kb on - strand, within Psest_0312 at 334.970 kb on - strand, within Psest_0312 at 334.970 kb on - strand, within Psest_0312 at 334.970 kb on - strand, within Psest_0312 at 335.212 kb on - strand, within Psest_0312 at 335.662 kb on + strand, within Psest_0312 at 335.662 kb on + strand, within Psest_0312 at 335.662 kb on + strand, within Psest_0312 at 335.663 kb on - strand, within Psest_0312 at 335.663 kb on - strand, within Psest_0312 at 335.970 kb on + strand at 335.970 kb on + strand at 335.970 kb on + strand at 335.971 kb on - strand at 336.061 kb on + strand at 336.061 kb on + strand at 336.061 kb on + strand at 336.061 kb on + strand at 336.061 kb on + strand at 336.062 kb on - strand at 336.062 kb on - strand at 336.062 kb on - strand at 336.062 kb on - strand at 336.065 kb on + strand at 336.065 kb on + strand at 336.065 kb on + strand at 336.065 kb on + strand at 336.065 kb on + strand at 336.065 kb on + strand at 336.065 kb on + strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.066 kb on - strand at 336.067 kb on + strand at 336.067 kb on + strand at 336.067 kb on + strand at 336.068 kb on - strand at 336.068 kb on - strand at 336.086 kb on + strand at 336.108 kb on + strand at 336.108 kb on + strand at 336.109 kb on - strand at 336.109 kb on - strand at 336.109 kb on - strand at 336.109 kb on - strand at 336.110 kb on + strand at 336.110 kb on + strand at 336.110 kb on + strand at 336.111 kb on - strand at 336.178 kb on + strand at 336.179 kb on - strand at 336.264 kb on + strand at 336.438 kb on + strand, within Psest_0313 at 336.439 kb on - strand, within Psest_0313 at 336.510 kb on + strand, within Psest_0313 at 336.510 kb on + strand, within Psest_0313 at 336.510 kb on + strand, within Psest_0313 at 336.516 kb on + strand, within Psest_0313 at 336.516 kb on + strand, within Psest_0313 at 336.516 kb on + strand, within Psest_0313 at 336.517 kb on - strand, within Psest_0313 at 336.537 kb on + strand, within Psest_0313 at 336.538 kb on - strand, within Psest_0313 at 336.538 kb on - strand, within Psest_0313 at 336.786 kb on + strand, within Psest_0313 at 336.786 kb on + strand, within Psest_0313 at 336.786 kb on + strand, within Psest_0313 at 336.786 kb on + strand, within Psest_0313 at 336.786 kb on + strand, within Psest_0313 at 336.787 kb on - strand, within Psest_0313 at 336.787 kb on - strand, within Psest_0313 at 336.787 kb on - strand, within Psest_0313 at 336.787 kb on - strand, within Psest_0313 at 336.787 kb on - strand, within Psest_0313 at 336.787 kb on - strand, within Psest_0313 at 336.860 kb on + strand, within Psest_0313 at 336.924 kb on + strand, within Psest_0313 at 336.925 kb on - strand, within Psest_0313
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 333,222 + Psest_0311 0.41 -1.0 333,223 - Psest_0311 0.42 -0.0 333,337 - Psest_0311 0.50 -1.1 333,472 + Psest_0311 0.59 -0.5 333,473 - Psest_0311 0.59 +0.9 333,473 - Psest_0311 0.59 -0.7 333,804 + Psest_0311 0.82 -1.5 333,805 - Psest_0311 0.82 +3.0 333,805 - Psest_0311 0.82 -2.2 333,856 - Psest_0311 0.86 -1.8 333,858 + Psest_0311 0.86 +0.1 333,858 + Psest_0311 0.86 -0.6 333,858 + Psest_0311 0.86 -1.3 333,858 + Psest_0311 0.86 -2.1 333,859 - Psest_0311 0.86 +2.7 333,859 - Psest_0311 0.86 +0.3 333,859 - Psest_0311 0.86 -1.5 333,859 - Psest_0311 0.86 -0.5 333,859 - Psest_0311 0.86 +0.5 333,859 - Psest_0311 0.86 +2.5 333,859 - Psest_0311 0.86 -0.2 333,896 + Psest_0311 0.89 +1.2 333,901 - Psest_0311 0.89 -0.1 333,901 - Psest_0311 0.89 -1.9 334,206 + +0.1 334,206 + +2.6 334,540 + +1.0 334,540 + Psest_0312 0.22 +1.0 334,969 + Psest_0312 0.45 +1.9 334,969 + Psest_0312 0.45 -0.7 334,969 + Psest_0312 0.45 +1.5 334,969 + Psest_0312 0.45 +1.2 334,969 + Psest_0312 0.45 +1.2 334,969 + Psest_0312 0.45 -0.0 334,969 + Psest_0312 0.45 +3.0 334,969 + Psest_0312 0.45 +0.8 334,969 + Psest_0312 0.45 -0.5 334,969 + Psest_0312 0.45 -0.5 334,969 + Psest_0312 0.45 -1.5 334,969 + Psest_0312 0.45 +1.0 334,970 - Psest_0312 0.45 +1.0 334,970 - Psest_0312 0.45 +1.6 334,970 - Psest_0312 0.45 -0.2 334,970 - Psest_0312 0.45 +2.4 334,970 - Psest_0312 0.45 +1.8 335,212 - Psest_0312 0.58 +1.4 335,662 + Psest_0312 0.83 +2.4 335,662 + Psest_0312 0.83 -0.5 335,662 + Psest_0312 0.83 +1.2 335,663 - Psest_0312 0.83 +1.0 335,663 - Psest_0312 0.83 +2.0 335,970 + +0.1 335,970 + +0.6 335,970 + -1.3 335,971 - +1.5 336,061 + +1.4 336,061 + +2.6 336,061 + +1.1 336,061 + +0.3 336,061 + +0.7 336,062 - +0.3 336,062 - +2.2 336,062 - +1.2 336,062 - -1.3 336,065 + +1.6 336,065 + +0.5 336,065 + +2.4 336,065 + +0.0 336,065 + -0.1 336,065 + +2.9 336,065 + +1.5 336,066 - +0.0 336,066 - -0.7 336,066 - +3.1 336,066 - +0.5 336,066 - +0.1 336,066 - +0.1 336,066 - +0.2 336,066 - +0.6 336,066 - +1.8 336,066 - +2.6 336,066 - +1.0 336,066 - -0.2 336,066 - +0.9 336,066 - +3.0 336,066 - +0.1 336,066 - -0.9 336,066 - -0.6 336,067 + -0.7 336,067 + +0.9 336,067 + +0.9 336,068 - +1.0 336,068 - +1.5 336,086 + +1.4 336,108 + -0.2 336,108 + +1.1 336,109 - +0.5 336,109 - +0.2 336,109 - +1.3 336,109 - +1.9 336,110 + +1.1 336,110 + +0.6 336,110 + -0.7 336,111 - +0.5 336,178 + +1.0 336,179 - -0.1 336,264 + -0.5 336,438 + Psest_0313 0.25 +1.5 336,439 - Psest_0313 0.25 +0.7 336,510 + Psest_0313 0.33 -1.2 336,510 + Psest_0313 0.33 -1.8 336,510 + Psest_0313 0.33 -0.8 336,516 + Psest_0313 0.34 -1.2 336,516 + Psest_0313 0.34 +0.5 336,516 + Psest_0313 0.34 +1.1 336,517 - Psest_0313 0.34 -1.4 336,537 + Psest_0313 0.36 +0.4 336,538 - Psest_0313 0.36 -0.3 336,538 - Psest_0313 0.36 +0.6 336,786 + Psest_0313 0.63 -1.1 336,786 + Psest_0313 0.63 -2.4 336,786 + Psest_0313 0.63 +1.3 336,786 + Psest_0313 0.63 -2.1 336,786 + Psest_0313 0.63 -1.2 336,787 - Psest_0313 0.63 +0.6 336,787 - Psest_0313 0.63 +1.0 336,787 - Psest_0313 0.63 +1.0 336,787 - Psest_0313 0.63 +0.3 336,787 - Psest_0313 0.63 +0.7 336,787 - Psest_0313 0.63 +0.7 336,860 + Psest_0313 0.71 -1.2 336,924 + Psest_0313 0.78 -2.3 336,925 - Psest_0313 0.78 +0.0
Or see this region's nucleotide sequence