Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2775 and Psest_2776 are separated by 9 nucleotides Psest_2776 and Psest_2777 overlap by 4 nucleotides Psest_2777 and Psest_2778 are separated by 158 nucleotides Psest_2778 and Psest_2779 are separated by 98 nucleotides
Psest_2775: Psest_2775 - Glycerol-3-phosphate dehydrogenase, at 2,972,252 to 2,973,787
_2775
Psest_2776: Psest_2776 - Uncharacterized protein conserved in bacteria, at 2,973,797 to 2,974,084
_2776
Psest_2777: Psest_2777 - hypothetical protein, at 2,974,081 to 2,974,308
_2777
Psest_2778: Psest_2778 - Parvulin-like peptidyl-prolyl isomerase, at 2,974,467 to 2,974,748
_2778
Psest_2779: Psest_2779 - Methyl-accepting chemotaxis protein, at 2,974,847 to 2,976,442
_2779
Position (kb)
2974
2975 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2973.612 kb on - strand, within Psest_2775 at 2974.300 kb on - strand at 2974.447 kb on - strand at 2974.653 kb on - strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.657 kb on + strand, within Psest_2778 at 2974.658 kb on - strand, within Psest_2778 at 2975.467 kb on + strand, within Psest_2779 at 2975.527 kb on + strand, within Psest_2779 at 2975.527 kb on + strand, within Psest_2779 at 2975.528 kb on - strand, within Psest_2779 at 2975.528 kb on - strand, within Psest_2779 at 2975.528 kb on - strand, within Psest_2779 at 2975.724 kb on + strand, within Psest_2779 at 2975.724 kb on + strand, within Psest_2779 at 2975.725 kb on - strand, within Psest_2779
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,973,612 - Psest_2775 0.89 +1.8 2,974,300 - +1.1 2,974,447 - -1.1 2,974,653 - Psest_2778 0.66 -1.9 2,974,657 + Psest_2778 0.67 +0.9 2,974,657 + Psest_2778 0.67 -0.3 2,974,657 + Psest_2778 0.67 -0.9 2,974,657 + Psest_2778 0.67 +2.1 2,974,658 - Psest_2778 0.68 +2.4 2,975,467 + Psest_2779 0.39 +2.0 2,975,527 + Psest_2779 0.43 -1.2 2,975,527 + Psest_2779 0.43 +0.7 2,975,528 - Psest_2779 0.43 +0.3 2,975,528 - Psest_2779 0.43 +0.2 2,975,528 - Psest_2779 0.43 +0.6 2,975,724 + Psest_2779 0.55 +0.5 2,975,724 + Psest_2779 0.55 +0.8 2,975,725 - Psest_2779 0.55 +0.4
Or see this region's nucleotide sequence