Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2570 and Psest_2571 are separated by 176 nucleotides Psest_2571 and Psest_2572 are separated by 45 nucleotides Psest_2572 and Psest_2574 are separated by 406 nucleotides Psest_2574 and Psest_2575 are separated by 37 nucleotides Psest_2575 and Psest_2576 are separated by 257 nucleotides
Psest_2570: Psest_2570 - Transcriptional regulator, at 2,751,709 to 2,752,617
_2570
Psest_2571: Psest_2571 - Glutathione S-transferase, at 2,752,794 to 2,753,423
_2571
Psest_2572: Psest_2572 - Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase, at 2,753,469 to 2,754,446
_2572
Psest_2574: Psest_2574 - tRNA_Asp_GTC, at 2,754,853 to 2,754,929
_2574
Psest_2575: Psest_2575 - tRNA_Val_CAC, at 2,754,967 to 2,755,042
_2575
Psest_2576: Psest_2576 - hypothetical protein, at 2,755,300 to 2,755,944
_2576
Position (kb)
2753
2754
2755 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2752.648 kb on + strand at 2752.649 kb on - strand at 2752.649 kb on - strand at 2752.649 kb on - strand at 2752.787 kb on + strand at 2752.787 kb on + strand at 2752.787 kb on + strand at 2752.788 kb on - strand at 2753.016 kb on + strand, within Psest_2571 at 2753.196 kb on - strand, within Psest_2571 at 2753.280 kb on + strand, within Psest_2571 at 2753.280 kb on + strand, within Psest_2571 at 2753.281 kb on - strand, within Psest_2571 at 2753.281 kb on - strand, within Psest_2571 at 2753.281 kb on - strand, within Psest_2571 at 2753.281 kb on - strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.286 kb on + strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.287 kb on - strand, within Psest_2571 at 2753.381 kb on - strand at 2753.421 kb on + strand at 2753.422 kb on - strand at 2753.422 kb on - strand at 2753.493 kb on - strand at 2753.493 kb on - strand at 2753.677 kb on + strand, within Psest_2572 at 2753.913 kb on + strand, within Psest_2572 at 2753.913 kb on + strand, within Psest_2572 at 2753.913 kb on + strand, within Psest_2572 at 2753.913 kb on + strand, within Psest_2572 at 2753.914 kb on - strand, within Psest_2572 at 2753.914 kb on - strand, within Psest_2572 at 2753.914 kb on - strand, within Psest_2572 at 2753.914 kb on - strand, within Psest_2572 at 2753.931 kb on + strand, within Psest_2572 at 2753.932 kb on - strand, within Psest_2572 at 2753.932 kb on - strand, within Psest_2572 at 2753.932 kb on - strand, within Psest_2572 at 2754.045 kb on + strand, within Psest_2572 at 2754.046 kb on - strand, within Psest_2572 at 2754.046 kb on - strand, within Psest_2572 at 2754.046 kb on - strand, within Psest_2572 at 2754.055 kb on - strand, within Psest_2572 at 2754.241 kb on + strand, within Psest_2572 at 2754.241 kb on + strand, within Psest_2572 at 2754.241 kb on + strand, within Psest_2572 at 2754.241 kb on + strand, within Psest_2572 at 2754.242 kb on - strand, within Psest_2572 at 2754.242 kb on - strand, within Psest_2572 at 2754.242 kb on - strand, within Psest_2572 at 2754.242 kb on - strand, within Psest_2572 at 2754.242 kb on - strand, within Psest_2572 at 2754.242 kb on - strand, within Psest_2572 at 2754.449 kb on - strand at 2754.449 kb on - strand at 2754.449 kb on - strand at 2754.449 kb on - strand at 2754.606 kb on - strand at 2754.832 kb on - strand at 2755.068 kb on - strand at 2755.068 kb on - strand at 2755.085 kb on - strand at 2755.223 kb on - strand at 2755.293 kb on - strand at 2755.327 kb on + strand at 2755.384 kb on + strand, within Psest_2576 at 2755.384 kb on + strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.385 kb on - strand, within Psest_2576 at 2755.443 kb on + strand, within Psest_2576 at 2755.444 kb on - strand, within Psest_2576 at 2755.444 kb on - strand, within Psest_2576
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,752,648 + -1.4 2,752,649 - -0.8 2,752,649 - -2.5 2,752,649 - -0.7 2,752,787 + +2.3 2,752,787 + +0.9 2,752,787 + +0.7 2,752,788 - -1.4 2,753,016 + Psest_2571 0.35 -1.0 2,753,196 - Psest_2571 0.64 -0.3 2,753,280 + Psest_2571 0.77 -0.7 2,753,280 + Psest_2571 0.77 -1.4 2,753,281 - Psest_2571 0.77 -0.9 2,753,281 - Psest_2571 0.77 -0.3 2,753,281 - Psest_2571 0.77 +1.0 2,753,281 - Psest_2571 0.77 -1.8 2,753,286 + Psest_2571 0.78 +0.4 2,753,286 + Psest_2571 0.78 -0.0 2,753,286 + Psest_2571 0.78 +1.9 2,753,286 + Psest_2571 0.78 +0.4 2,753,286 + Psest_2571 0.78 -2.0 2,753,286 + Psest_2571 0.78 +1.1 2,753,286 + Psest_2571 0.78 -1.7 2,753,286 + Psest_2571 0.78 +0.7 2,753,286 + Psest_2571 0.78 +1.8 2,753,286 + Psest_2571 0.78 +1.8 2,753,286 + Psest_2571 0.78 -1.9 2,753,286 + Psest_2571 0.78 -0.9 2,753,286 + Psest_2571 0.78 +0.6 2,753,286 + Psest_2571 0.78 +2.3 2,753,287 - Psest_2571 0.78 -0.8 2,753,287 - Psest_2571 0.78 +0.3 2,753,287 - Psest_2571 0.78 -3.2 2,753,287 - Psest_2571 0.78 +0.9 2,753,287 - Psest_2571 0.78 -0.5 2,753,287 - Psest_2571 0.78 +0.6 2,753,287 - Psest_2571 0.78 -0.1 2,753,287 - Psest_2571 0.78 +2.1 2,753,381 - -0.2 2,753,421 + -2.1 2,753,422 - +0.4 2,753,422 - -1.7 2,753,493 - -0.1 2,753,493 - +0.3 2,753,677 + Psest_2572 0.21 -0.4 2,753,913 + Psest_2572 0.45 +0.3 2,753,913 + Psest_2572 0.45 -0.7 2,753,913 + Psest_2572 0.45 -0.5 2,753,913 + Psest_2572 0.45 +0.4 2,753,914 - Psest_2572 0.46 -0.6 2,753,914 - Psest_2572 0.46 -0.3 2,753,914 - Psest_2572 0.46 -0.8 2,753,914 - Psest_2572 0.46 -1.1 2,753,931 + Psest_2572 0.47 -1.5 2,753,932 - Psest_2572 0.47 -0.2 2,753,932 - Psest_2572 0.47 +1.3 2,753,932 - Psest_2572 0.47 -0.4 2,754,045 + Psest_2572 0.59 +1.5 2,754,046 - Psest_2572 0.59 -0.3 2,754,046 - Psest_2572 0.59 -0.3 2,754,046 - Psest_2572 0.59 -1.8 2,754,055 - Psest_2572 0.60 +0.5 2,754,241 + Psest_2572 0.79 -1.2 2,754,241 + Psest_2572 0.79 -1.1 2,754,241 + Psest_2572 0.79 +1.4 2,754,241 + Psest_2572 0.79 -0.2 2,754,242 - Psest_2572 0.79 -0.0 2,754,242 - Psest_2572 0.79 -0.9 2,754,242 - Psest_2572 0.79 -0.7 2,754,242 - Psest_2572 0.79 +0.3 2,754,242 - Psest_2572 0.79 +1.0 2,754,242 - Psest_2572 0.79 -0.8 2,754,449 - -0.4 2,754,449 - +0.9 2,754,449 - +0.7 2,754,449 - -0.5 2,754,606 - -0.4 2,754,832 - +1.5 2,755,068 - -1.9 2,755,068 - +0.5 2,755,085 - -1.2 2,755,223 - -0.1 2,755,293 - -1.3 2,755,327 + +1.6 2,755,384 + Psest_2576 0.13 -0.3 2,755,384 + Psest_2576 0.13 -0.2 2,755,385 - Psest_2576 0.13 +1.3 2,755,385 - Psest_2576 0.13 +0.2 2,755,385 - Psest_2576 0.13 +1.0 2,755,385 - Psest_2576 0.13 +1.2 2,755,443 + Psest_2576 0.22 +1.0 2,755,444 - Psest_2576 0.22 -0.9 2,755,444 - Psest_2576 0.22 -0.6
Or see this region's nucleotide sequence