Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2449 and Psest_2450 are separated by 239 nucleotides Psest_2450 and Psest_2451 are separated by 261 nucleotides Psest_2451 and Psest_2452 are separated by 64 nucleotides
Psest_2449: Psest_2449 - Predicted membrane protein, at 2,618,314 to 2,618,751
_2449
Psest_2450: Psest_2450 - hypothetical protein, at 2,618,991 to 2,619,446
_2450
Psest_2451: Psest_2451 - Glutaredoxin and related proteins, at 2,619,708 to 2,620,814
_2451
Psest_2452: Psest_2452 - Cytochrome c bacterial./Doubled CXXCH motif (Paired_CXXCH_1)., at 2,620,879 to 2,622,465
_2452
Position (kb)
2619
2620
2621 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2618.792 kb on + strand at 2618.793 kb on - strand at 2618.992 kb on + strand at 2618.993 kb on - strand at 2618.993 kb on - strand at 2619.149 kb on + strand, within Psest_2450 at 2619.184 kb on + strand, within Psest_2450 at 2619.230 kb on - strand, within Psest_2450 at 2619.235 kb on + strand, within Psest_2450 at 2619.236 kb on - strand, within Psest_2450 at 2619.236 kb on - strand, within Psest_2450 at 2619.236 kb on - strand, within Psest_2450 at 2619.236 kb on - strand, within Psest_2450 at 2619.320 kb on + strand, within Psest_2450 at 2619.322 kb on + strand, within Psest_2450 at 2619.322 kb on + strand, within Psest_2450 at 2619.322 kb on + strand, within Psest_2450 at 2619.322 kb on + strand, within Psest_2450 at 2619.322 kb on + strand, within Psest_2450 at 2619.322 kb on + strand, within Psest_2450 at 2619.323 kb on - strand, within Psest_2450 at 2619.323 kb on - strand, within Psest_2450 at 2619.323 kb on - strand, within Psest_2450 at 2619.556 kb on + strand at 2619.556 kb on + strand at 2619.602 kb on + strand at 2619.602 kb on + strand at 2619.602 kb on + strand at 2619.711 kb on + strand at 2619.711 kb on + strand at 2619.711 kb on + strand at 2619.711 kb on + strand at 2619.712 kb on - strand at 2619.712 kb on - strand at 2619.712 kb on - strand at 2619.931 kb on + strand, within Psest_2451 at 2619.932 kb on - strand, within Psest_2451 at 2620.281 kb on + strand, within Psest_2451 at 2620.281 kb on + strand, within Psest_2451 at 2620.281 kb on + strand, within Psest_2451 at 2620.282 kb on - strand, within Psest_2451 at 2620.284 kb on + strand, within Psest_2451 at 2620.284 kb on + strand, within Psest_2451 at 2620.284 kb on + strand, within Psest_2451 at 2620.284 kb on + strand, within Psest_2451 at 2620.284 kb on + strand, within Psest_2451 at 2620.285 kb on - strand, within Psest_2451 at 2620.285 kb on - strand, within Psest_2451 at 2620.285 kb on - strand, within Psest_2451 at 2620.340 kb on - strand, within Psest_2451 at 2620.581 kb on + strand, within Psest_2451 at 2620.581 kb on + strand, within Psest_2451 at 2620.632 kb on + strand, within Psest_2451 at 2620.632 kb on + strand, within Psest_2451 at 2620.633 kb on - strand, within Psest_2451 at 2620.644 kb on + strand, within Psest_2451 at 2620.644 kb on + strand, within Psest_2451 at 2620.645 kb on - strand, within Psest_2451 at 2620.645 kb on - strand, within Psest_2451 at 2620.645 kb on - strand, within Psest_2451 at 2620.656 kb on + strand, within Psest_2451 at 2620.657 kb on - strand, within Psest_2451 at 2620.657 kb on - strand, within Psest_2451 at 2620.657 kb on - strand, within Psest_2451 at 2620.657 kb on - strand, within Psest_2451 at 2620.657 kb on - strand, within Psest_2451 at 2620.694 kb on - strand, within Psest_2451 at 2620.718 kb on + strand at 2620.719 kb on - strand at 2620.719 kb on - strand at 2620.834 kb on + strand at 2620.834 kb on + strand at 2620.834 kb on + strand at 2620.834 kb on + strand at 2620.835 kb on - strand at 2620.835 kb on - strand at 2620.835 kb on - strand at 2620.835 kb on - strand at 2620.835 kb on - strand at 2621.040 kb on + strand, within Psest_2452 at 2621.040 kb on + strand, within Psest_2452 at 2621.040 kb on + strand, within Psest_2452 at 2621.041 kb on - strand, within Psest_2452 at 2621.041 kb on - strand, within Psest_2452 at 2621.041 kb on - strand, within Psest_2452 at 2621.275 kb on + strand, within Psest_2452 at 2621.275 kb on + strand, within Psest_2452 at 2621.275 kb on + strand, within Psest_2452 at 2621.276 kb on - strand, within Psest_2452 at 2621.426 kb on - strand, within Psest_2452 at 2621.429 kb on - strand, within Psest_2452 at 2621.504 kb on + strand, within Psest_2452 at 2621.504 kb on + strand, within Psest_2452 at 2621.504 kb on + strand, within Psest_2452 at 2621.504 kb on + strand, within Psest_2452 at 2621.505 kb on - strand, within Psest_2452 at 2621.505 kb on - strand, within Psest_2452 at 2621.505 kb on - strand, within Psest_2452 at 2621.505 kb on - strand, within Psest_2452 at 2621.505 kb on - strand, within Psest_2452 at 2621.754 kb on + strand, within Psest_2452 at 2621.755 kb on - strand, within Psest_2452 at 2621.755 kb on - strand, within Psest_2452 at 2621.785 kb on - strand, within Psest_2452
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,618,792 + -0.8 2,618,793 - +0.8 2,618,992 + -0.7 2,618,993 - +0.1 2,618,993 - +1.8 2,619,149 + Psest_2450 0.35 -1.2 2,619,184 + Psest_2450 0.42 +0.1 2,619,230 - Psest_2450 0.52 +1.3 2,619,235 + Psest_2450 0.54 -0.8 2,619,236 - Psest_2450 0.54 +1.1 2,619,236 - Psest_2450 0.54 -2.3 2,619,236 - Psest_2450 0.54 -0.9 2,619,236 - Psest_2450 0.54 -0.3 2,619,320 + Psest_2450 0.72 -0.8 2,619,322 + Psest_2450 0.73 +0.2 2,619,322 + Psest_2450 0.73 -1.2 2,619,322 + Psest_2450 0.73 +1.1 2,619,322 + Psest_2450 0.73 -1.6 2,619,322 + Psest_2450 0.73 +1.2 2,619,322 + Psest_2450 0.73 +1.3 2,619,323 - Psest_2450 0.73 -0.3 2,619,323 - Psest_2450 0.73 +1.4 2,619,323 - Psest_2450 0.73 +1.4 2,619,556 + -1.3 2,619,556 + -0.7 2,619,602 + -0.8 2,619,602 + -0.6 2,619,602 + -1.7 2,619,711 + -2.1 2,619,711 + -2.4 2,619,711 + +0.5 2,619,711 + -0.5 2,619,712 - -0.1 2,619,712 - +1.9 2,619,712 - -1.0 2,619,931 + Psest_2451 0.20 -0.3 2,619,932 - Psest_2451 0.20 -0.0 2,620,281 + Psest_2451 0.52 +0.1 2,620,281 + Psest_2451 0.52 -0.7 2,620,281 + Psest_2451 0.52 -0.2 2,620,282 - Psest_2451 0.52 +2.9 2,620,284 + Psest_2451 0.52 +0.1 2,620,284 + Psest_2451 0.52 +1.3 2,620,284 + Psest_2451 0.52 +0.7 2,620,284 + Psest_2451 0.52 +1.9 2,620,284 + Psest_2451 0.52 +1.4 2,620,285 - Psest_2451 0.52 +1.2 2,620,285 - Psest_2451 0.52 +0.4 2,620,285 - Psest_2451 0.52 +0.7 2,620,340 - Psest_2451 0.57 +1.5 2,620,581 + Psest_2451 0.79 -0.2 2,620,581 + Psest_2451 0.79 -0.5 2,620,632 + Psest_2451 0.83 +1.8 2,620,632 + Psest_2451 0.83 +2.8 2,620,633 - Psest_2451 0.84 -2.3 2,620,644 + Psest_2451 0.85 -0.0 2,620,644 + Psest_2451 0.85 +2.7 2,620,645 - Psest_2451 0.85 +2.0 2,620,645 - Psest_2451 0.85 +1.7 2,620,645 - Psest_2451 0.85 -2.1 2,620,656 + Psest_2451 0.86 +0.6 2,620,657 - Psest_2451 0.86 +0.4 2,620,657 - Psest_2451 0.86 +0.0 2,620,657 - Psest_2451 0.86 -0.7 2,620,657 - Psest_2451 0.86 +2.4 2,620,657 - Psest_2451 0.86 +0.4 2,620,694 - Psest_2451 0.89 +2.9 2,620,718 + +1.7 2,620,719 - -2.4 2,620,719 - +2.2 2,620,834 + +0.9 2,620,834 + -0.5 2,620,834 + +1.2 2,620,834 + -0.1 2,620,835 - -1.9 2,620,835 - +0.5 2,620,835 - +1.6 2,620,835 - +0.3 2,620,835 - -1.2 2,621,040 + Psest_2452 0.10 -0.2 2,621,040 + Psest_2452 0.10 -1.9 2,621,040 + Psest_2452 0.10 +0.1 2,621,041 - Psest_2452 0.10 +2.7 2,621,041 - Psest_2452 0.10 +0.4 2,621,041 - Psest_2452 0.10 -1.2 2,621,275 + Psest_2452 0.25 +2.5 2,621,275 + Psest_2452 0.25 -0.5 2,621,275 + Psest_2452 0.25 -0.1 2,621,276 - Psest_2452 0.25 -0.6 2,621,426 - Psest_2452 0.34 -0.4 2,621,429 - Psest_2452 0.35 +0.5 2,621,504 + Psest_2452 0.39 -0.6 2,621,504 + Psest_2452 0.39 +0.1 2,621,504 + Psest_2452 0.39 -1.9 2,621,504 + Psest_2452 0.39 +0.8 2,621,505 - Psest_2452 0.39 -0.0 2,621,505 - Psest_2452 0.39 -0.2 2,621,505 - Psest_2452 0.39 +2.6 2,621,505 - Psest_2452 0.39 -1.0 2,621,505 - Psest_2452 0.39 +0.8 2,621,754 + Psest_2452 0.55 +0.8 2,621,755 - Psest_2452 0.55 +0.7 2,621,755 - Psest_2452 0.55 +2.4 2,621,785 - Psest_2452 0.57 -0.0
Or see this region's nucleotide sequence