Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2368 and Psest_2369 are separated by 64 nucleotides Psest_2369 and Psest_2370 overlap by 12 nucleotides Psest_2370 and Psest_2371 are separated by 336 nucleotides Psest_2371 and Psest_2372 are separated by 128 nucleotides
Psest_2368: Psest_2368 - ABC transporter periplasmic binding protein, urea carboxylase region, at 2,522,192 to 2,523,256
_2368
Psest_2369: Psest_2369 - Transcriptional regulator, at 2,523,321 to 2,523,941
_2369
Psest_2370: Psest_2370 - Protein of unknown function (DUF1652)., at 2,523,930 to 2,524,202
_2370
Psest_2371: Psest_2371 - tRNA_Ser_TGA, at 2,524,539 to 2,524,628
_2371
Psest_2372: Psest_2372 - Integral membrane protein, interacts with FtsH, at 2,524,757 to 2,525,425
_2372
Position (kb)
2523
2524 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 2522.327 kb on + strand, within Psest_2368 at 2522.327 kb on + strand, within Psest_2368 at 2522.327 kb on + strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.328 kb on - strand, within Psest_2368 at 2522.369 kb on + strand, within Psest_2368 at 2522.370 kb on - strand, within Psest_2368 at 2522.370 kb on - strand, within Psest_2368 at 2522.405 kb on + strand, within Psest_2368 at 2522.406 kb on - strand, within Psest_2368 at 2522.406 kb on - strand, within Psest_2368 at 2522.406 kb on - strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.627 kb on + strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.628 kb on - strand, within Psest_2368 at 2522.764 kb on - strand, within Psest_2368 at 2522.764 kb on - strand, within Psest_2368 at 2522.764 kb on - strand, within Psest_2368 at 2522.907 kb on - strand, within Psest_2368 at 2523.000 kb on - strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.025 kb on + strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.026 kb on - strand, within Psest_2368 at 2523.032 kb on + strand, within Psest_2368 at 2523.032 kb on + strand, within Psest_2368 at 2523.033 kb on - strand, within Psest_2368 at 2523.097 kb on - strand, within Psest_2368 at 2523.224 kb on + strand at 2523.224 kb on + strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.225 kb on - strand at 2523.403 kb on - strand, within Psest_2369 at 2523.462 kb on + strand, within Psest_2369 at 2523.462 kb on + strand, within Psest_2369 at 2523.492 kb on + strand, within Psest_2369 at 2523.493 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2523.802 kb on - strand, within Psest_2369 at 2524.042 kb on - strand, within Psest_2370 at 2524.153 kb on + strand, within Psest_2370 at 2524.154 kb on - strand, within Psest_2370 at 2524.154 kb on - strand, within Psest_2370 at 2524.156 kb on + strand, within Psest_2370 at 2524.157 kb on - strand, within Psest_2370 at 2524.237 kb on - strand at 2524.237 kb on - strand at 2524.290 kb on + strand at 2524.472 kb on + strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.663 kb on - strand at 2524.684 kb on - strand at 2524.706 kb on - strand at 2524.833 kb on - strand, within Psest_2372 at 2524.833 kb on - strand, within Psest_2372 at 2524.937 kb on + strand, within Psest_2372 at 2524.938 kb on - strand, within Psest_2372
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,522,327 + Psest_2368 0.13 +2.0 2,522,327 + Psest_2368 0.13 -0.3 2,522,327 + Psest_2368 0.13 -0.1 2,522,328 - Psest_2368 0.13 -2.0 2,522,328 - Psest_2368 0.13 +1.0 2,522,328 - Psest_2368 0.13 +0.8 2,522,328 - Psest_2368 0.13 -0.4 2,522,369 + Psest_2368 0.17 +1.5 2,522,370 - Psest_2368 0.17 -1.3 2,522,370 - Psest_2368 0.17 +0.1 2,522,405 + Psest_2368 0.20 +0.6 2,522,406 - Psest_2368 0.20 +0.9 2,522,406 - Psest_2368 0.20 -0.9 2,522,406 - Psest_2368 0.20 -1.3 2,522,627 + Psest_2368 0.41 +0.8 2,522,627 + Psest_2368 0.41 +1.0 2,522,627 + Psest_2368 0.41 -0.0 2,522,627 + Psest_2368 0.41 -1.0 2,522,628 - Psest_2368 0.41 -0.6 2,522,628 - Psest_2368 0.41 -0.7 2,522,628 - Psest_2368 0.41 -1.2 2,522,628 - Psest_2368 0.41 +0.6 2,522,628 - Psest_2368 0.41 +1.3 2,522,764 - Psest_2368 0.54 -0.1 2,522,764 - Psest_2368 0.54 +0.6 2,522,764 - Psest_2368 0.54 -0.9 2,522,907 - Psest_2368 0.67 +0.0 2,523,000 - Psest_2368 0.76 +0.7 2,523,025 + Psest_2368 0.78 +0.4 2,523,025 + Psest_2368 0.78 +0.2 2,523,025 + Psest_2368 0.78 +0.2 2,523,025 + Psest_2368 0.78 -1.8 2,523,025 + Psest_2368 0.78 -2.5 2,523,025 + Psest_2368 0.78 +2.1 2,523,025 + Psest_2368 0.78 -0.1 2,523,025 + Psest_2368 0.78 -0.2 2,523,025 + Psest_2368 0.78 -1.5 2,523,025 + Psest_2368 0.78 +0.8 2,523,025 + Psest_2368 0.78 +1.7 2,523,025 + Psest_2368 0.78 +0.2 2,523,025 + Psest_2368 0.78 -0.2 2,523,025 + Psest_2368 0.78 +0.8 2,523,025 + Psest_2368 0.78 -1.0 2,523,026 - Psest_2368 0.78 +1.5 2,523,026 - Psest_2368 0.78 +0.6 2,523,026 - Psest_2368 0.78 +0.2 2,523,026 - Psest_2368 0.78 +2.3 2,523,026 - Psest_2368 0.78 +0.8 2,523,026 - Psest_2368 0.78 +1.2 2,523,026 - Psest_2368 0.78 -0.5 2,523,026 - Psest_2368 0.78 +1.6 2,523,026 - Psest_2368 0.78 -0.9 2,523,026 - Psest_2368 0.78 -0.5 2,523,026 - Psest_2368 0.78 +1.7 2,523,026 - Psest_2368 0.78 -0.5 2,523,026 - Psest_2368 0.78 -0.2 2,523,026 - Psest_2368 0.78 -0.0 2,523,026 - Psest_2368 0.78 -1.0 2,523,026 - Psest_2368 0.78 -0.2 2,523,026 - Psest_2368 0.78 -0.7 2,523,026 - Psest_2368 0.78 +0.9 2,523,026 - Psest_2368 0.78 +2.4 2,523,026 - Psest_2368 0.78 -0.3 2,523,026 - Psest_2368 0.78 +1.0 2,523,032 + Psest_2368 0.79 -0.4 2,523,032 + Psest_2368 0.79 +0.7 2,523,033 - Psest_2368 0.79 -0.3 2,523,097 - Psest_2368 0.85 -0.1 2,523,224 + -0.3 2,523,224 + -1.1 2,523,225 - +1.6 2,523,225 - -2.0 2,523,225 - -1.3 2,523,225 - +0.6 2,523,225 - +1.4 2,523,225 - -3.2 2,523,225 - -1.1 2,523,225 - -0.9 2,523,403 - Psest_2369 0.13 +0.8 2,523,462 + Psest_2369 0.23 +1.2 2,523,462 + Psest_2369 0.23 -1.3 2,523,492 + Psest_2369 0.28 -0.8 2,523,493 - Psest_2369 0.28 +1.8 2,523,802 - Psest_2369 0.77 +1.3 2,523,802 - Psest_2369 0.77 +3.3 2,523,802 - Psest_2369 0.77 -0.9 2,523,802 - Psest_2369 0.77 -1.4 2,524,042 - Psest_2370 0.41 -0.8 2,524,153 + Psest_2370 0.82 +1.4 2,524,154 - Psest_2370 0.82 -0.0 2,524,154 - Psest_2370 0.82 +1.2 2,524,156 + Psest_2370 0.83 -0.9 2,524,157 - Psest_2370 0.83 -1.3 2,524,237 - -0.3 2,524,237 - -1.0 2,524,290 + -0.5 2,524,472 + -0.0 2,524,663 - -1.9 2,524,663 - -1.5 2,524,663 - +5.5 2,524,663 - +0.9 2,524,663 - +2.0 2,524,663 - +2.3 2,524,663 - -1.4 2,524,663 - +0.3 2,524,663 - +0.2 2,524,684 - -2.9 2,524,706 - +1.2 2,524,833 - Psest_2372 0.11 -1.4 2,524,833 - Psest_2372 0.11 -1.3 2,524,937 + Psest_2372 0.27 -0.1 2,524,938 - Psest_2372 0.27 -1.2
Or see this region's nucleotide sequence