Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2086 and Psest_2087 are separated by 109 nucleotides Psest_2087 and Psest_2088 are separated by 59 nucleotides Psest_2088 and Psest_2089 overlap by 17 nucleotides
Psest_2086: Psest_2086 - putative quinone oxidoreductase, YhdH/YhfP family, at 2,215,134 to 2,216,126
_2086
Psest_2087: Psest_2087 - hypothetical protein, at 2,216,236 to 2,216,337
_2087
Psest_2088: Psest_2088 - Uncharacterized protein conserved in bacteria, at 2,216,397 to 2,216,897
_2088
Psest_2089: Psest_2089 - Sulfite reductase, beta subunit (hemoprotein), at 2,216,881 to 2,218,539
_2089
Position (kb)
2216
2217 Strain fitness (log2 ratio)
-2
-1
0
1 at 2215.446 kb on + strand, within Psest_2086 at 2215.516 kb on + strand, within Psest_2086 at 2215.517 kb on - strand, within Psest_2086 at 2215.628 kb on + strand, within Psest_2086 at 2215.659 kb on + strand, within Psest_2086 at 2215.661 kb on + strand, within Psest_2086 at 2215.661 kb on + strand, within Psest_2086 at 2215.661 kb on + strand, within Psest_2086 at 2215.661 kb on + strand, within Psest_2086 at 2215.661 kb on + strand, within Psest_2086 at 2215.661 kb on + strand, within Psest_2086 at 2215.662 kb on - strand, within Psest_2086 at 2215.662 kb on - strand, within Psest_2086 at 2215.662 kb on - strand, within Psest_2086 at 2215.675 kb on + strand, within Psest_2086 at 2215.916 kb on + strand, within Psest_2086 at 2215.916 kb on + strand, within Psest_2086 at 2216.113 kb on + strand at 2216.113 kb on + strand at 2216.114 kb on - strand at 2216.138 kb on + strand at 2216.139 kb on - strand at 2216.139 kb on - strand at 2216.317 kb on - strand, within Psest_2087 at 2216.330 kb on - strand at 2216.330 kb on - strand at 2216.449 kb on + strand, within Psest_2088 at 2216.449 kb on + strand, within Psest_2088 at 2216.449 kb on + strand, within Psest_2088
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,215,446 + Psest_2086 0.31 -0.1 2,215,516 + Psest_2086 0.38 +0.5 2,215,517 - Psest_2086 0.39 +0.8 2,215,628 + Psest_2086 0.50 -2.3 2,215,659 + Psest_2086 0.53 +1.3 2,215,661 + Psest_2086 0.53 +1.3 2,215,661 + Psest_2086 0.53 -1.0 2,215,661 + Psest_2086 0.53 -0.2 2,215,661 + Psest_2086 0.53 +1.0 2,215,661 + Psest_2086 0.53 -0.1 2,215,661 + Psest_2086 0.53 -1.7 2,215,662 - Psest_2086 0.53 +1.6 2,215,662 - Psest_2086 0.53 +0.4 2,215,662 - Psest_2086 0.53 -0.8 2,215,675 + Psest_2086 0.54 -1.9 2,215,916 + Psest_2086 0.79 +0.5 2,215,916 + Psest_2086 0.79 +0.6 2,216,113 + +0.4 2,216,113 + -0.6 2,216,114 - -0.6 2,216,138 + -1.5 2,216,139 - +1.5 2,216,139 - -1.2 2,216,317 - Psest_2087 0.79 -1.0 2,216,330 - -0.7 2,216,330 - +0.1 2,216,449 + Psest_2088 0.10 +0.6 2,216,449 + Psest_2088 0.10 +0.9 2,216,449 + Psest_2088 0.10 +1.6
Or see this region's nucleotide sequence