Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2042 and Psest_2043 are separated by 18 nucleotides Psest_2043 and Psest_2044 overlap by 4 nucleotides Psest_2044 and Psest_2045 are separated by 138 nucleotides
Psest_2042: Psest_2042 - PQQ-dependent catabolism-associated beta-propeller protein, at 2,162,790 to 2,163,761
_2042
Psest_2043: Psest_2043 - Sel1 repeat., at 2,163,780 to 2,164,277
_2043
Psest_2044: Psest_2044 - ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system, at 2,164,274 to 2,165,461
_2044
Psest_2045: Psest_2045 - Methyl-accepting chemotaxis protein, at 2,165,600 to 2,167,774
_2045
Position (kb)
2164
2165
2166 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.430 kb on + strand, within Psest_2042 at 2163.431 kb on - strand, within Psest_2042 at 2163.431 kb on - strand, within Psest_2042 at 2163.431 kb on - strand, within Psest_2042 at 2163.431 kb on - strand, within Psest_2042 at 2163.431 kb on - strand, within Psest_2042 at 2163.556 kb on + strand, within Psest_2042 at 2163.556 kb on + strand, within Psest_2042 at 2163.556 kb on + strand, within Psest_2042 at 2163.556 kb on + strand, within Psest_2042 at 2163.556 kb on + strand, within Psest_2042 at 2163.556 kb on + strand, within Psest_2042 at 2163.557 kb on - strand, within Psest_2042 at 2163.557 kb on - strand, within Psest_2042 at 2163.557 kb on - strand, within Psest_2042 at 2163.682 kb on + strand at 2163.683 kb on - strand at 2163.683 kb on - strand at 2163.683 kb on - strand at 2163.683 kb on - strand at 2163.683 kb on - strand at 2163.829 kb on + strand at 2163.958 kb on + strand, within Psest_2043 at 2163.958 kb on + strand, within Psest_2043 at 2163.959 kb on - strand, within Psest_2043 at 2163.959 kb on - strand, within Psest_2043 at 2164.045 kb on + strand, within Psest_2043 at 2164.045 kb on + strand, within Psest_2043 at 2164.045 kb on + strand, within Psest_2043 at 2164.045 kb on + strand, within Psest_2043 at 2164.046 kb on - strand, within Psest_2043 at 2164.046 kb on - strand, within Psest_2043 at 2164.072 kb on + strand, within Psest_2043 at 2164.072 kb on + strand, within Psest_2043 at 2164.073 kb on - strand, within Psest_2043 at 2164.073 kb on - strand, within Psest_2043 at 2164.150 kb on + strand, within Psest_2043 at 2164.151 kb on - strand, within Psest_2043 at 2164.189 kb on + strand, within Psest_2043 at 2164.189 kb on + strand, within Psest_2043 at 2164.189 kb on + strand, within Psest_2043 at 2164.189 kb on + strand, within Psest_2043 at 2164.190 kb on - strand, within Psest_2043 at 2164.190 kb on - strand, within Psest_2043 at 2164.190 kb on - strand, within Psest_2043 at 2164.190 kb on - strand, within Psest_2043 at 2164.440 kb on + strand, within Psest_2044 at 2164.641 kb on + strand, within Psest_2044 at 2164.719 kb on + strand, within Psest_2044 at 2164.728 kb on + strand, within Psest_2044 at 2164.729 kb on - strand, within Psest_2044 at 2164.773 kb on + strand, within Psest_2044 at 2164.774 kb on - strand, within Psest_2044 at 2165.226 kb on + strand, within Psest_2044 at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.450 kb on + strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.451 kb on - strand at 2165.491 kb on + strand at 2165.491 kb on + strand at 2165.491 kb on + strand at 2165.492 kb on - strand at 2165.492 kb on - strand at 2165.516 kb on + strand at 2165.527 kb on + strand at 2165.714 kb on + strand at 2165.715 kb on - strand at 2165.715 kb on - strand at 2166.202 kb on - strand, within Psest_2045 at 2166.202 kb on - strand, within Psest_2045 at 2166.365 kb on + strand, within Psest_2045
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 2,163,430 + Psest_2042 0.66 +0.2 2,163,430 + Psest_2042 0.66 +1.6 2,163,430 + Psest_2042 0.66 +1.1 2,163,430 + Psest_2042 0.66 -0.2 2,163,430 + Psest_2042 0.66 +3.0 2,163,430 + Psest_2042 0.66 -0.8 2,163,430 + Psest_2042 0.66 -1.7 2,163,430 + Psest_2042 0.66 -1.8 2,163,430 + Psest_2042 0.66 -1.5 2,163,431 - Psest_2042 0.66 -0.9 2,163,431 - Psest_2042 0.66 +0.5 2,163,431 - Psest_2042 0.66 -1.3 2,163,431 - Psest_2042 0.66 -0.9 2,163,431 - Psest_2042 0.66 -1.5 2,163,556 + Psest_2042 0.79 +0.5 2,163,556 + Psest_2042 0.79 +0.2 2,163,556 + Psest_2042 0.79 -1.3 2,163,556 + Psest_2042 0.79 -0.7 2,163,556 + Psest_2042 0.79 -0.1 2,163,556 + Psest_2042 0.79 +1.6 2,163,557 - Psest_2042 0.79 +1.4 2,163,557 - Psest_2042 0.79 -0.4 2,163,557 - Psest_2042 0.79 +1.7 2,163,682 + +0.7 2,163,683 - +0.8 2,163,683 - -0.5 2,163,683 - -0.1 2,163,683 - +0.6 2,163,683 - +1.3 2,163,829 + +1.4 2,163,958 + Psest_2043 0.36 -0.2 2,163,958 + Psest_2043 0.36 +0.8 2,163,959 - Psest_2043 0.36 +2.1 2,163,959 - Psest_2043 0.36 -0.4 2,164,045 + Psest_2043 0.53 +0.3 2,164,045 + Psest_2043 0.53 +1.1 2,164,045 + Psest_2043 0.53 +0.5 2,164,045 + Psest_2043 0.53 +0.6 2,164,046 - Psest_2043 0.53 -1.0 2,164,046 - Psest_2043 0.53 +0.6 2,164,072 + Psest_2043 0.59 -1.0 2,164,072 + Psest_2043 0.59 +2.1 2,164,073 - Psest_2043 0.59 -1.2 2,164,073 - Psest_2043 0.59 -1.7 2,164,150 + Psest_2043 0.74 +0.4 2,164,151 - Psest_2043 0.74 +0.6 2,164,189 + Psest_2043 0.82 -0.3 2,164,189 + Psest_2043 0.82 -0.3 2,164,189 + Psest_2043 0.82 +1.2 2,164,189 + Psest_2043 0.82 -0.4 2,164,190 - Psest_2043 0.82 +1.3 2,164,190 - Psest_2043 0.82 -1.2 2,164,190 - Psest_2043 0.82 -0.4 2,164,190 - Psest_2043 0.82 -0.2 2,164,440 + Psest_2044 0.14 +2.8 2,164,641 + Psest_2044 0.31 -0.4 2,164,719 + Psest_2044 0.37 +3.1 2,164,728 + Psest_2044 0.38 +0.4 2,164,729 - Psest_2044 0.38 +0.5 2,164,773 + Psest_2044 0.42 -1.6 2,164,774 - Psest_2044 0.42 +0.2 2,165,226 + Psest_2044 0.80 +1.6 2,165,450 + -0.7 2,165,450 + +1.2 2,165,450 + +0.4 2,165,450 + -0.8 2,165,450 + -0.3 2,165,450 + -1.1 2,165,450 + +0.4 2,165,450 + -1.3 2,165,450 + -1.1 2,165,450 + -0.7 2,165,450 + -0.8 2,165,451 - -1.2 2,165,451 - +0.3 2,165,451 - +0.7 2,165,451 - +1.9 2,165,451 - -0.7 2,165,451 - -0.2 2,165,451 - +0.1 2,165,451 - +1.5 2,165,491 + +1.4 2,165,491 + -0.6 2,165,491 + +0.6 2,165,492 - +0.3 2,165,492 - -0.2 2,165,516 + -1.8 2,165,527 + -0.5 2,165,714 + -0.2 2,165,715 - -0.5 2,165,715 - -2.8 2,166,202 - Psest_2045 0.28 -0.6 2,166,202 - Psest_2045 0.28 -0.6 2,166,365 + Psest_2045 0.35 -0.0
Or see this region's nucleotide sequence