Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1877 and Psest_1878 are separated by 81 nucleotides Psest_1878 and Psest_1879 are separated by 0 nucleotides
Psest_1877: Psest_1877 - AraC-type DNA-binding domain-containing proteins, at 1,987,608 to 1,988,657
_1877
Psest_1878: Psest_1878 - Uncharacterized protein conserved in bacteria, at 1,988,739 to 1,989,671
_1878
Psest_1879: Psest_1879 - Trk-type K+ transport systems, membrane components, at 1,989,672 to 1,991,123
_1879
Position (kb)
1988
1989
1990 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1988.217 kb on + strand, within Psest_1877 at 1988.310 kb on + strand, within Psest_1877 at 1988.310 kb on + strand, within Psest_1877 at 1988.311 kb on - strand, within Psest_1877 at 1988.553 kb on + strand at 1988.553 kb on + strand at 1988.554 kb on - strand at 1988.655 kb on + strand at 1988.655 kb on + strand at 1988.683 kb on + strand at 1988.684 kb on - strand at 1988.684 kb on - strand at 1988.684 kb on - strand at 1988.687 kb on + strand at 1989.534 kb on + strand, within Psest_1878 at 1989.534 kb on + strand, within Psest_1878 at 1989.534 kb on + strand, within Psest_1878 at 1989.534 kb on + strand, within Psest_1878 at 1990.156 kb on + strand, within Psest_1879 at 1990.238 kb on + strand, within Psest_1879 at 1990.558 kb on + strand, within Psest_1879 at 1990.558 kb on + strand, within Psest_1879 at 1990.558 kb on + strand, within Psest_1879 at 1990.558 kb on + strand, within Psest_1879 at 1990.558 kb on - strand, within Psest_1879 at 1990.559 kb on - strand, within Psest_1879 at 1990.559 kb on - strand, within Psest_1879
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 1,988,217 + Psest_1877 0.58 +1.1 1,988,310 + Psest_1877 0.67 +0.8 1,988,310 + Psest_1877 0.67 -1.2 1,988,311 - Psest_1877 0.67 -0.4 1,988,553 + +2.8 1,988,553 + +0.8 1,988,554 - -0.4 1,988,655 + -0.4 1,988,655 + +0.2 1,988,683 + +0.4 1,988,684 - +0.6 1,988,684 - +0.6 1,988,684 - -1.3 1,988,687 + -1.1 1,989,534 + Psest_1878 0.85 -1.6 1,989,534 + Psest_1878 0.85 -1.1 1,989,534 + Psest_1878 0.85 -1.1 1,989,534 + Psest_1878 0.85 +0.3 1,990,156 + Psest_1879 0.33 -2.4 1,990,238 + Psest_1879 0.39 -1.4 1,990,558 + Psest_1879 0.61 -1.5 1,990,558 + Psest_1879 0.61 +0.1 1,990,558 + Psest_1879 0.61 +0.6 1,990,558 + Psest_1879 0.61 +1.6 1,990,558 - Psest_1879 0.61 -0.6 1,990,559 - Psest_1879 0.61 -1.4 1,990,559 - Psest_1879 0.61 +0.9
Or see this region's nucleotide sequence