Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1694 and Psest_1695 are separated by 31 nucleotides Psest_1695 and Psest_1696 are separated by 103 nucleotides Psest_1696 and Psest_1697 are separated by 110 nucleotides
Psest_1694: Psest_1694 - DNA polymerase III, delta' subunit, at 1,801,433 to 1,802,419
_1694
Psest_1695: Psest_1695 - Tfp pilus assembly protein PilZ, at 1,802,451 to 1,802,807
_1695
Psest_1696: Psest_1696 - hydrolase, TatD family, at 1,802,911 to 1,803,696
_1696
Psest_1697: Psest_1697 - Gamma-aminobutyrate permease and related permeases, at 1,803,807 to 1,805,201
_1697
Position (kb)
1802
1803 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1802.523 kb on + strand, within Psest_1695 at 1802.583 kb on + strand, within Psest_1695 at 1802.760 kb on + strand, within Psest_1695 at 1802.760 kb on + strand, within Psest_1695 at 1802.760 kb on + strand, within Psest_1695 at 1802.760 kb on + strand, within Psest_1695 at 1802.760 kb on + strand, within Psest_1695 at 1802.761 kb on - strand, within Psest_1695 at 1802.806 kb on - strand at 1802.900 kb on + strand at 1802.901 kb on - strand at 1802.901 kb on - strand at 1802.918 kb on + strand at 1802.918 kb on + strand at 1802.918 kb on + strand at 1802.919 kb on - strand at 1802.919 kb on - strand at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.026 kb on + strand, within Psest_1696 at 1803.027 kb on - strand, within Psest_1696 at 1803.027 kb on - strand, within Psest_1696 at 1803.027 kb on - strand, within Psest_1696 at 1803.027 kb on - strand, within Psest_1696 at 1803.208 kb on + strand, within Psest_1696 at 1803.208 kb on + strand, within Psest_1696 at 1803.214 kb on + strand, within Psest_1696 at 1803.286 kb on - strand, within Psest_1696 at 1803.286 kb on - strand, within Psest_1696 at 1803.338 kb on + strand, within Psest_1696 at 1803.338 kb on + strand, within Psest_1696 at 1803.338 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.427 kb on + strand, within Psest_1696 at 1803.428 kb on - strand, within Psest_1696 at 1803.428 kb on - strand, within Psest_1696 at 1803.428 kb on - strand, within Psest_1696 at 1803.428 kb on - strand, within Psest_1696 at 1803.428 kb on - strand, within Psest_1696 at 1803.428 kb on - strand, within Psest_1696 at 1803.429 kb on + strand, within Psest_1696 at 1803.482 kb on + strand, within Psest_1696 at 1803.482 kb on + strand, within Psest_1696 at 1803.577 kb on + strand, within Psest_1696 at 1803.578 kb on - strand, within Psest_1696 at 1803.578 kb on - strand, within Psest_1696 at 1803.578 kb on - strand, within Psest_1696 at 1803.806 kb on + strand at 1803.806 kb on + strand at 1803.806 kb on + strand at 1803.806 kb on + strand at 1803.806 kb on + strand at 1803.806 kb on + strand at 1803.807 kb on - strand at 1803.807 kb on - strand at 1803.807 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 1,802,523 + Psest_1695 0.20 -1.7 1,802,583 + Psest_1695 0.37 +2.5 1,802,760 + Psest_1695 0.87 -1.8 1,802,760 + Psest_1695 0.87 -0.4 1,802,760 + Psest_1695 0.87 +0.8 1,802,760 + Psest_1695 0.87 +1.2 1,802,760 + Psest_1695 0.87 +1.9 1,802,761 - Psest_1695 0.87 +1.0 1,802,806 - +0.8 1,802,900 + +0.2 1,802,901 - +0.0 1,802,901 - -1.6 1,802,918 + -0.5 1,802,918 + -0.2 1,802,918 + -1.8 1,802,919 - +1.4 1,802,919 - +4.2 1,803,026 + Psest_1696 0.15 +0.5 1,803,026 + Psest_1696 0.15 -1.9 1,803,026 + Psest_1696 0.15 -0.1 1,803,026 + Psest_1696 0.15 +1.2 1,803,026 + Psest_1696 0.15 +0.8 1,803,026 + Psest_1696 0.15 +1.5 1,803,026 + Psest_1696 0.15 -1.0 1,803,026 + Psest_1696 0.15 -0.2 1,803,026 + Psest_1696 0.15 +1.0 1,803,027 - Psest_1696 0.15 +1.5 1,803,027 - Psest_1696 0.15 -0.3 1,803,027 - Psest_1696 0.15 +2.0 1,803,027 - Psest_1696 0.15 -0.6 1,803,208 + Psest_1696 0.38 -0.1 1,803,208 + Psest_1696 0.38 +0.7 1,803,214 + Psest_1696 0.39 -0.1 1,803,286 - Psest_1696 0.48 -1.5 1,803,286 - Psest_1696 0.48 +2.8 1,803,338 + Psest_1696 0.54 -0.9 1,803,338 + Psest_1696 0.54 +2.6 1,803,338 + Psest_1696 0.54 +1.9 1,803,427 + Psest_1696 0.66 -0.5 1,803,427 + Psest_1696 0.66 -0.0 1,803,427 + Psest_1696 0.66 +0.2 1,803,427 + Psest_1696 0.66 +1.9 1,803,427 + Psest_1696 0.66 +0.2 1,803,427 + Psest_1696 0.66 +1.1 1,803,427 + Psest_1696 0.66 -0.5 1,803,427 + Psest_1696 0.66 -1.0 1,803,427 + Psest_1696 0.66 +0.4 1,803,427 + Psest_1696 0.66 +0.4 1,803,427 + Psest_1696 0.66 +0.6 1,803,428 - Psest_1696 0.66 +1.0 1,803,428 - Psest_1696 0.66 -1.6 1,803,428 - Psest_1696 0.66 +0.6 1,803,428 - Psest_1696 0.66 +2.2 1,803,428 - Psest_1696 0.66 +0.5 1,803,428 - Psest_1696 0.66 -0.1 1,803,429 + Psest_1696 0.66 -1.1 1,803,482 + Psest_1696 0.73 -2.1 1,803,482 + Psest_1696 0.73 -2.5 1,803,577 + Psest_1696 0.85 -0.9 1,803,578 - Psest_1696 0.85 +0.2 1,803,578 - Psest_1696 0.85 +1.6 1,803,578 - Psest_1696 0.85 +0.2 1,803,806 + -0.4 1,803,806 + -0.9 1,803,806 + -0.8 1,803,806 + +0.2 1,803,806 + +1.4 1,803,806 + +1.6 1,803,807 - +1.0 1,803,807 - -0.6 1,803,807 - -0.8
Or see this region's nucleotide sequence