Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1589
Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.05 vol% |
---|---|---|---|---|---|
remove | |||||
1,692,976 | - | +0.0 | |||
1,693,010 | + | Psest_1588 | 0.11 | -0.4 | |
1,693,010 | + | Psest_1588 | 0.11 | +0.1 | |
1,693,010 | + | Psest_1588 | 0.11 | -1.7 | |
1,693,010 | + | Psest_1588 | 0.11 | -0.5 | |
1,693,010 | + | Psest_1588 | 0.11 | +1.8 | |
1,693,011 | - | Psest_1588 | 0.12 | -1.3 | |
1,693,011 | - | Psest_1588 | 0.12 | +0.7 | |
1,693,011 | - | Psest_1588 | 0.12 | -1.2 | |
1,693,450 | - | Psest_1588 | 0.56 | -1.6 | |
1,694,206 | + | -0.9 | |||
1,694,207 | - | -0.4 | |||
1,694,261 | + | +1.6 | |||
1,694,261 | + | -0.7 | |||
1,694,261 | + | +0.9 | |||
1,694,297 | + | -1.6 | |||
1,694,451 | - | Psest_1590 | 0.14 | +0.6 | |
1,694,580 | + | Psest_1590 | 0.22 | +1.7 | |
1,694,580 | + | Psest_1590 | 0.22 | +0.2 | |
1,694,580 | + | Psest_1590 | 0.22 | +0.6 | |
1,694,597 | + | Psest_1590 | 0.22 | +0.5 | |
1,694,988 | - | Psest_1590 | 0.44 | +2.0 | |
1,695,134 | + | Psest_1590 | 0.53 | +1.1 | |
1,695,134 | + | Psest_1590 | 0.53 | -0.4 | |
1,695,134 | + | Psest_1590 | 0.53 | -1.0 | |
1,695,134 | + | Psest_1590 | 0.53 | -0.9 | |
1,695,134 | + | Psest_1590 | 0.53 | +0.3 | |
1,695,134 | + | Psest_1590 | 0.53 | -1.3 | |
1,695,134 | + | Psest_1590 | 0.53 | +1.7 | |
1,695,135 | - | Psest_1590 | 0.53 | -0.8 | |
1,695,135 | - | Psest_1590 | 0.53 | +1.3 |
Or see this region's nucleotide sequence