Experiment: 2-Furfuraldehyde 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1259 and Psest_1260 are separated by 11 nucleotides Psest_1260 and Psest_1261 overlap by 4 nucleotides Psest_1261 and Psest_1262 are separated by 7 nucleotides
Psest_1259: Psest_1259 - 23S rRNA m2A2503 methyltransferase, at 1,363,907 to 1,365,055
_1259
Psest_1260: Psest_1260 - type IV pilus biogenesis/stability protein PilW, at 1,365,067 to 1,365,825
_1260
Psest_1261: Psest_1261 - Uncharacterized protein conserved in bacteria, at 1,365,822 to 1,366,832
_1261
Psest_1262: Psest_1262 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, at 1,366,840 to 1,367,952
_1262
Position (kb)
1365
1366
1367 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1364.990 kb on + strand at 1364.990 kb on + strand at 1364.990 kb on + strand at 1364.990 kb on + strand at 1364.990 kb on + strand at 1365.009 kb on + strand at 1365.009 kb on + strand at 1365.095 kb on + strand at 1365.095 kb on + strand at 1365.095 kb on + strand at 1365.184 kb on + strand, within Psest_1260 at 1365.184 kb on + strand, within Psest_1260 at 1365.184 kb on + strand, within Psest_1260 at 1365.184 kb on + strand, within Psest_1260 at 1365.184 kb on + strand, within Psest_1260 at 1365.186 kb on + strand, within Psest_1260 at 1365.394 kb on + strand, within Psest_1260 at 1365.394 kb on + strand, within Psest_1260 at 1365.472 kb on + strand, within Psest_1260 at 1365.472 kb on + strand, within Psest_1260 at 1365.472 kb on + strand, within Psest_1260 at 1365.555 kb on + strand, within Psest_1260 at 1365.634 kb on + strand, within Psest_1260 at 1365.634 kb on + strand, within Psest_1260 at 1365.634 kb on + strand, within Psest_1260 at 1365.634 kb on + strand, within Psest_1260 at 1365.655 kb on + strand, within Psest_1260 at 1365.805 kb on + strand at 1365.805 kb on + strand at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1365.998 kb on + strand, within Psest_1261 at 1366.183 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.726 kb on + strand, within Psest_1261 at 1366.761 kb on + strand at 1366.761 kb on + strand at 1366.761 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.05 vol% remove 1,364,990 + -0.7 1,364,990 + +2.7 1,364,990 + -0.3 1,364,990 + +1.5 1,364,990 + +0.8 1,365,009 + +0.4 1,365,009 + +1.6 1,365,095 + -1.5 1,365,095 + -1.9 1,365,095 + +2.1 1,365,184 + Psest_1260 0.15 +1.6 1,365,184 + Psest_1260 0.15 -0.3 1,365,184 + Psest_1260 0.15 +0.2 1,365,184 + Psest_1260 0.15 -1.5 1,365,184 + Psest_1260 0.15 +1.6 1,365,186 + Psest_1260 0.16 +0.6 1,365,394 + Psest_1260 0.43 -1.0 1,365,394 + Psest_1260 0.43 -0.2 1,365,472 + Psest_1260 0.53 -0.6 1,365,472 + Psest_1260 0.53 +0.8 1,365,472 + Psest_1260 0.53 +1.3 1,365,555 + Psest_1260 0.64 +0.6 1,365,634 + Psest_1260 0.75 +1.2 1,365,634 + Psest_1260 0.75 +0.7 1,365,634 + Psest_1260 0.75 +0.3 1,365,634 + Psest_1260 0.75 +1.7 1,365,655 + Psest_1260 0.77 -1.0 1,365,805 + -0.3 1,365,805 + -0.3 1,365,998 + Psest_1261 0.17 +0.7 1,365,998 + Psest_1261 0.17 -0.9 1,365,998 + Psest_1261 0.17 -0.5 1,365,998 + Psest_1261 0.17 -0.1 1,365,998 + Psest_1261 0.17 -0.4 1,365,998 + Psest_1261 0.17 -1.6 1,365,998 + Psest_1261 0.17 +2.3 1,365,998 + Psest_1261 0.17 -1.5 1,365,998 + Psest_1261 0.17 +0.7 1,365,998 + Psest_1261 0.17 +4.2 1,365,998 + Psest_1261 0.17 +2.8 1,365,998 + Psest_1261 0.17 -1.0 1,366,183 + Psest_1261 0.36 +0.3 1,366,726 + Psest_1261 0.89 -0.1 1,366,726 + Psest_1261 0.89 +0.6 1,366,726 + Psest_1261 0.89 +0.8 1,366,726 + Psest_1261 0.89 +0.3 1,366,726 + Psest_1261 0.89 +2.1 1,366,726 + Psest_1261 0.89 -0.6 1,366,726 + Psest_1261 0.89 +1.3 1,366,761 + +0.5 1,366,761 + -1.8 1,366,761 + +2.3
Or see this region's nucleotide sequence